Polyodon spathula (Mississippi paddlefish): 121312716
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Entry
121312716 CDS
T07273
Name
(RefSeq) occludin-like
KO
K06088
occludin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa04514
Cell adhesion molecules
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121312716
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121312716
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121312716
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121312716
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121312716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
DASH_Dad1
DUF4164
Keratin_2_head
DASH_Dad2
NTR2
Laminin_II
Motif
Other DBs
NCBI-GeneID:
121312716
NCBI-ProteinID:
XP_041100353
LinkDB
All DBs
Position
1:complement(3216417..3232204)
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AA seq
506 aa
AA seq
DB search
MSSKPYGSPPPYHPGSGYNPSNYAPSRGIYGEPMGSQPAFSYYPEDEKEQNFYKWNSPPG
IIKILSVIIVVLCVGIFACIASTLAWDTDMTNVGGMGMGMGTGIGGYGGYGSGFGSGSSS
YGGYSGAGLGVGGNYTNPRTAKGFMIAMAAICFVAMLAVFIITVSRSNIGRSRKFYLAVI
IFCTVLAVMMFIATIVYLIGVNPTAQAAGSAFYNQVVMLCAQFQNPQQSGIFINQYLYHY
CVVEPQEAIAIVFGVIVTVALAIIIFFAVKTRGKINKYGKMNINWEKEHVPVEGTANVED
WVNNVTGEPGDLVSDYPEKFNGSMCMVDEEPSRVQSPPPKVLVPLSNPPPKVYSSSSEDP
STQRKPPKKRRPGRARKADTQGYDTDYTTGGESGEELDNDDLESEYPPIRGDQQRQEYKR
EFDADLQEYKKLQAEMDEINKDLSRLDRELDELQEGTQEYESVADEFYLLKDKKRSADYR
KKKQRCKYLKAKLSHIKKVVADYDRS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaaaccatatggaagccctccgccctatcatcccgggagtggatacaacccg
tcaaactatgcaccgagcagaggcatatacggcgagcctatgggttcccagcctgcattc
tcctactatccagaggacgagaaggaacagaatttctacaagtggaattccccgccagga
atcatcaagatcctctctgtaatcatcgtcgtcctgtgtgtcggcatctttgcctgcata
gcttccacactggcttgggacacagacatgaccaacgtggggggcatgggcatgggtatg
ggcacaggaattggggggtacggcggttacgggagtggcttcggctcgggctcctcatct
tacggcggctacagcggggcaggattgggcgtcggaggcaactacaccaacccccgcaca
gccaagggcttcatgattgccatggccgccatttgctttgtcgcaatgctggcggtcttc
atcatcaccgtctccaggtcgaacataggcaggtcgcgcaagttctacctggctgtgatc
atcttctgcaccgtccttgccgtcatgatgttcatcgccaccatcgtctacctcattggg
gtgaaccccactgcacaggctgccggctctgcgttctacaaccaagtggtcatgctgtgc
gcgcagttccagaacccacagcaatcagggatcttcatcaaccagtatctgtaccactac
tgcgtcgtggaaccacaagaggcaattgccattgtgtttggcgtgatcgtcactgtggca
ttggccattatcattttctttgctgtgaaaacacgcggcaagataaataaatatgggaaa
atgaacatcaactgggaaaaggagcatgttccagtagaaggaacagccaatgtcgaggat
tgggtaaacaacgtgacaggagagccgggtgatctggtgtccgactatccagagaaattc
aacggctcaatgtgcatggtggatgaggagcccagcagagtccagtcccctcctcctaaa
gtgttggttcctctgagcaatccgccccccaaagtgtacagcagcagctctgaggacccg
tcgactcagaggaagcctcccaagaagaggagaccgggtcgggccaggaaagcagacaca
cagggctacgacactgactacaccaccggaggggagtccggggaggagctggacaacgac
gaccttgaaagtgagtaccccccaatcaggggagaccagcagaggcaggagtacaagcgc
gagtttgacgctgacctgcaggaatacaagaagctgcaggcggagatggacgaaatcaac
aaggacctgtctcgactggacagagagctggacgagctgcaggaagggacgcaggagtac
gagtctgttgctgatgaattttacttattaaaggacaaaaagagatctgccgactatcgg
aagaaaaaacagcgctgcaaatacctgaaagcaaaactgtctcacatcaagaaggtggtc
gctgattacgaccgatcatga
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