Polyodon spathula (Mississippi paddlefish): 121312719
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Entry
121312719 CDS
T07273
Name
(RefSeq) cadherin-7-like isoform X1
KO
K06799
cadherin 7, type 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121312719
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Major cadherins
121312719
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
MpPF26
DUF202
Motif
Other DBs
NCBI-GeneID:
121312719
NCBI-ProteinID:
XP_041100352
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All DBs
Position
3:complement(11282074..11314094)
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AA seq
784 aa
AA seq
DB search
MNCYAWLPILIAFTVLGHCFPKETNTRKHLQIKKASQQEQHVPHHRIRRGWKWNQLFVPE
EDPGPLCVGQLKSDDDKGNFSIKYILLGEGAGEVFRIDEDTGFIYTMKKLDREEKAFYTM
RAQAINRLTMQPVEPESEFIIKVQDINDNKPQFQNGPYVASIPEMCEVETSVIQVTATDA
DDPTHGNSARLIYSILQGQPYFSVEPKTGIIFTSLPDMDREAKEQHLVIIQVKDMVGQLG
GFSATTTVTVNLADINDNGPKFQQKLYHFSVPESATIGTMIGRIMADDSDIGENAEMNYT
IEEIDSSDMFDIMTDSDTQEGILILNKHLDYESKRRFSIRAVVINKHIDPQIVNLNQFKD
LTDIKITVEDVDEPPVFTALEYMLEILENSITGTFVGAVTARDQDVANNPIRYHIDQNTD
LKRMFKVAAHNGTITLAKPLDRETASWHNLTISASEEKKNGFLSRVPVFIRVIDINDNAP
EFSKRYTPYVCETAKPGQIIQTISATDKDDPMEGHHFYFTLATKTSMNTNFTVRDNQDNT
AGVLTRKNAFSRQEQVYFHLPIVITDDGEPALSSTNTLTIRVCDCYPDGSCSSSGVEAFA
LYVGISPGALIAILSCFLIILVLVLLILAVRRYKKEKVNSEKWEEVTENVVRYEDEGGEQ
DTEAFDVVTLRSHTKRKEPTPRNDMTARIRMSLRQSLRVGPDDDVFREFILERLHEADTD
PCAPPYNSLQTYAFEGDGSVAGSLSSLESDSTDTDQNYEYLSNWGPRFQRLASMYENDVK
DRDF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaactgttacgcttggctacccattctaattgctttcactgtgctggggcattgcttc
ccaaaagaaactaatacaagaaaacatctgcaaatcaaaaaggcctcacaacaagaacag
catgtacctcatcaccgtatcagacgtggatggaaatggaaccaattatttgttcctgaa
gaggacccaggaccactttgtgttggccagctcaaatctgatgatgacaaagggaacttt
tccataaagtatatactgttaggagagggagcaggagaagtttttagaattgatgaagat
acaggctttatctataccatgaagaaactggatcgagaagagaaagcattctacacaatg
cgtgcccaggccataaacaggttgaccatgcagccagtggaaccagaatctgaattcatt
attaaagttcaggatatcaatgacaataaaccacaattccaaaatggaccctatgttgcc
agcatccctgaaatgtgtgaagttgaaacttccgtcatacaagtgacagccacagatgct
gacgatcccacccatgggaacagtgcaagattaatctatagcattctacagggacagcca
tacttctctgttgaaccaaagacaggtattatttttacttccttacctgatatggacaga
gaggcaaaggagcagcatttggtgatcatacaggtcaaagatatggtaggacagctggga
gggttttctgcaacaacaactgtgactgtcaacttggctgatatcaatgacaatggtcca
aaattccaacagaagctataccacttttcagttcctgagtctgcaacgattggtacaatg
attggtcggatcatggctgatgacagtgatataggagagaacgcagaaatgaattacacc
attgaggaaatagacagttcagatatgtttgacattatgactgactctgacactcaggaa
gggatacttatactaaataagcacttggattatgagagtaaaagacggttcagcatcaga
gcagttgtcatcaacaaacacattgatcctcagattgtcaatcttaaccaattcaaagac
ttgactgatataaagatcactgtagaagatgttgatgagcctccagttttcactgctctt
gagtatatgctggagatacttgaaaactcaatcaccggaacatttgttggtgcagtcaca
gcaagagaccaagatgtagcaaataatcccattaggtatcatattgatcaaaacactgat
ttaaaaagaatgtttaaagtagctgcgcacaatggaacaatcacgcttgcaaaacctttg
gatcgagagacagcatcctggcacaatttaactatttcagcatcagaagaaaaaaagaat
ggttttctatctagagtaccagtatttatacgagttatagacattaatgacaatgcacca
gaattttcaaaacgttacacaccttatgtatgtgaaactgcaaaaccaggacagataatt
caaacaatcagtgcaacagataaagatgacccgatggaaggccatcacttctattttaca
ctggcaactaaaaccagcatgaacactaatttcactgtaagagataaccaagataacact
gctggagttctcacaagaaaaaatgcgtttagcaggcaggaacaggtttattttcaccta
ccaattgtcattacggatgatggagaaccagcgctcagcagtaccaatacccttaccatc
agagtgtgcgactgctatccggatggcagctgtagctctagtggggttgaagccttcgct
ctttatgttggtatcagccccggtgccctgattgccatcttgtcatgtttcctaataata
ttagtccttgtattacttatactggcagtaaggcgctataagaaggaaaaggtgaattct
gagaaatgggaagaagtcacagagaatgttgtgaggtatgaggatgaaggtggggaacag
gacactgaggcatttgacgtagtaactttaagatctcacactaaaaggaaagaaccaaca
ccaaggaatgatatgactgcacgtatccgaatgtcattaagacagtctcttagagttgga
cccgatgatgatgttttcagggagtttattttggaaagactgcatgaggctgatacagat
ccttgtgctcccccctataactccttacagacctatgcatttgagggagatggatcagtg
gctgggtctctcagctccctggaatcagacagcacagacacagatcaaaactatgaatac
ctgagtaactggggaccacgtttccaaagactggcatccatgtatgaaaatgatgtaaaa
gacagagatttttag
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