Polyodon spathula (Mississippi paddlefish): 121312768
Help
Entry
121312768 CDS
T07273
Name
(RefSeq) transcriptional repressor NF-X1-like isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121312768
04121 Ubiquitin system [BR:
pspa04121
]
121312768
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121312768
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
121312768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
121312768
NCBI-ProteinID:
XP_041100445
LinkDB
All DBs
Position
3:15825352..15844924
Genome browser
AA seq
1109 aa
AA seq
DB search
MAEAQTSGELELNPDAADFVLGEEKSQFQSRRSWPRPDFNRNRGGRYTAPHQQRSNISYC
NDEPLHERSYYNRQTYRTSEAPLDSRDGPSARGNHSFQNQRQNRSRNIRTFPTDHSRQFG
GSHSESFTEKPDKDDGLSWRTEDKRLNDFKNGFDPEDTRDARPKNPRKFTYEPRRGPGER
GKPALYRDEIEDLIEGDRENSLEMGSVEAAKARSNESALKLSHYGNKRAAQDSQRHGQQN
RDEHPTRQERSRSTKPQSASSQADRKINEMASSGKIHKPDSRSSWRSDVERGQGRRMPLQ
DHGPKKHLNSGRTHFCKKQLDVPKSKETHTGCLIEQLTEEKYECMVCCEVIRVMAPVWSC
QSCYHVFHLNCIKKWARSPASQAEDGNEGWRCPACQNVSVRAPNSYTCFCGKVNNPEWNR
NEIPHSCGELCCKKRSGLDCNHPCNILCHPGPCPSCPAFVTKACVCGKISQSVRCGQATM
IRCTDVCSSLLNCDKHTCMQVCHSGKCQPCQLQVSQVCYCGISSREVPCGTDKEHFDESG
HFSCQKLCGKMLDCGKHTCLQVCHPQPCQSCPRLPKVVSSCPCGQTPLSKLLELGYPERK
SCTDTIPSCGKTCAKPLPCGSNDSIHLCENLCHEKECGPCSLTSTVKCRCGFKSKAVPCA
VIQNEADLMFMCDKRCNKKRSCGRHKCNELCCVDKEHKCSMICGYKLNCGQHRCQELCHR
GNCHPCWQTSFDELPCHCGETVIYPPVPCGTRPPECKKPCTRKHECDHPVFHNCHSEEKC
PPCTYLTQKWCMGKHEQRNNIPCHLADISCGLTCNKQLLCGMHKCRRICHRGDCMTEEQC
KQPCCAVKQECGHACSAPCHQGSPCPRAPCTAKVVLQCDCGHKKESMVCSEASTNYQRIA
AIAIASRLSDMQLGDSMEIGQLITKKEMKQARLQCDEECAALERNKRLAEALNIDLSSDP
FNTRGSTSKFTDSLKEDARKELKFVSEVEEVMKNLVELANKGKQSKRSHCFPPMNRDHRK
IIHELAEVYGIESESYDSEPKRNVIITAVRGKTLCPNTTLTTLIERETATRPPPPIAHHR
QHTASSGNCSVMQKAVKEEPVIDYFDVQD
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcaaacctcaggtgaactggagctcaatccagatgctgcagattttgtt
ctgggagaagaaaagagccagtttcagtctagaagaagttggccaagaccagatttcaac
aggaacagagggggtcgatacacagcccctcaccagcagcgttctaacatatcttattgc
aacgatgagcccttacatgaaaggagctactataatcgtcaaacctacaggacctctgag
gcgcccttagatagtcgagatggccctagtgctagaggaaaccacagctttcaaaaccag
cggcaaaacagatccagaaacattagaacctttccaacagaccattcaagacagtttggt
ggcagccattcagaatctttcacagagaaacctgacaaagatgatgggctcagctggcgg
acagaggacaagaggcttaacgactttaaaaacggttttgaccctgaagacactagagat
gccagacctaaaaatccaaggaagttcacttatgagccgagaaggggtcctggtgagaga
ggaaagccagctttatacagggacgagatagaagatttgattgaaggagacagggaaaac
tcattggaaatgggttctgtggaagctgctaaagcaagatcaaacgagagtgcattgaag
ctctcccattatggcaataagagagcagcccaggattcccaaagacacgggcagcagaat
agagatgaacatccaacaaggcaggaacggagtaggagtacaaaacctcaaagtgcctca
tcccaggctgaccgcaagataaatgagatggctagctctgggaagattcacaagcctgat
agtagatcttcatggagaagtgatgtggagagagggcaaggaagaaggatgccattacaa
gatcatggaccaaagaaacatttgaattcaggcagaacacatttctgtaaaaagcagctg
gatgttcccaagagtaaagaaacacatacagggtgtctaattgaacagctcactgaagag
aagtatgaatgtatggtctgttgtgaggtaattcgtgtgatggcaccagtctggagctgt
cagagctgctaccacgtctttcatctaaactgtattaaaaagtgggccagatcaccagca
tcacaggcggaggatgggaatgaggggtggaggtgtcctgcctgccagaatgtatctgtt
cgtgcaccaaactcttacacctgcttctgtggaaaagttaataatcctgaatggaacaga
aatgagattccacacagctgtggagagctgtgttgcaaaaagcgttctggtctggactgc
aaccatccctgtaatatcttgtgccatcctggaccatgcccatcttgccctgcatttgta
accaaagcctgtgtttgtggaaaaataagtcaatctgtacgttgtggacaggcaactatg
attcgttgtactgatgtgtgcagcagcttgctaaactgtgacaagcatacctgtatgcag
gtgtgccacagtggaaaatgccaaccatgtcagctccaagtcagccaagtttgctattgt
ggaattagttctcgggaagtgccttgtgggacagataaagaacattttgatgagtctgga
catttttcctgtcaaaaactctgtggaaaaatgcttgactgtggcaagcacacttgtttg
caagtgtgccatccacagccatgtcagtcttgtcctcgtcttccaaaagtggtaagcagc
tgcccttgtgggcagactcccctctccaaacttttggagcttggttaccctgagcgcaag
agctgcacagataccattccatcatgtggaaaaacctgtgccaagccgttaccttgtggg
tcaaatgattcaattcatttgtgtgaaaacctttgccatgaaaaggaatgtggtccgtgc
tcacttacttctactgtcaaatgcagatgtggcttcaaaagtaaagcagttccatgtgcc
gttatccaaaatgaagctgaccttatgttcatgtgtgacaagcgttgcaataaaaaacgt
tcttgtggccgccacaagtgcaatgaactttgctgtgtggacaaagagcacaaatgttcc
atgatctgtgggtacaagctgaactgtggacagcataggtgtcaagagctttgtcatcgt
gggaactgtcacccgtgttggcaaaccagttttgatgaactgccatgtcactgtggtgaa
acagtgatctatccacccgttccctgcggtacaagaccacctgaatgtaaaaagccatgt
accaggaagcacgagtgtgatcatccagtgtttcacaactgccacagcgaggagaagtgc
ccaccttgtacctacctcactcagaagtggtgtatgggaaaacatgaacaaagaaacaat
attccctgtcacttggcagatatatcctgtggcctgacttgtaataaacagctgctgtgt
ggcatgcacaagtgcagaaggatctgccacagaggggattgtatgacagaggagcagtgt
aaacaaccttgctgtgctgtgaaacaggaatgtggtcatgcctgttcagcaccatgccac
caggggtccccctgtcccagggctccatgtacagcaaaggtagtgttacagtgtgactgt
gggcacaagaaggagagcatggtttgctctgaggcttcaaccaattatcaaagaatagct
gctatagccatagccagccgactttctgatatgcagctgggagactctatggaaatcggt
caactaattacaaagaaggaaatgaagcaagccaggttgcagtgtgatgaagagtgtgct
gcactagaaagaaacaaacggttggccgaggctctaaatatagaccttagttctgatcct
ttcaacacccgcggctcgacctctaaattcaccgacagtctgaaggaagacgcaaggaag
gaattaaagtttgtaagtgaagtggaagaagtgatgaaaaatctggtggagttggcaaat
aagggaaaacagtcaaagcggagtcattgcttccctccaatgaacagagatcaccgcaag
atcatccatgagttagctgaggtctatgggattgagagcgagagctacgacagtgaacca
aagcgcaatgttatcattacagcagtaagagggaaaacgctgtgccctaatactactctg
acaacactgatagaacgtgaaactgccacaagacctccaccacccatcgcccaccacagg
cagcacactgcaagttctggcaattgcagcgtcatgcaaaaggctgttaaagaggagcct
gtgattgactactttgatgtccaggattga
DBGET
integrated database retrieval system
