Polyodon spathula (Mississippi paddlefish): 121312779
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Entry
121312779 CDS
T07273
Name
(RefSeq) zinc finger FYVE domain-containing protein 16-like
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121312779
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121312779
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121312779
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121312779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SARA_C
SARA
FYVE
Motif
Other DBs
NCBI-GeneID:
121312779
NCBI-ProteinID:
XP_041100469
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All DBs
Position
1:3294872..3321562
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AA seq
1535 aa
AA seq
DB search
MDSYFKAVVCDLDKLLDDFEQNTDELTASASYCAPAFPAPSLNSHFVAESSPELASLHEL
KSLTYSTPADVSTSAAASGFQTKPLTELDLPTADSRASKNIAPPCLDRGLKPICDLVSNS
GSLIIRANNHDAFQKLDIVENQLEEGLLVDFDLPPACAAGDALQFSLSNVPGVQVFSEGG
LGLQGAGRLATGHLESLSLLDIILPPEAADEPVNRNSSSNTVHQGHLEEVLQNETGAQNV
REPNEEDGQEDQEFPCDPERTENGTTVLSKTECSEDSVAVNGTLDCTDAKELIHSKENMN
GEAKFNSSLEITACSSDKKQDCEEEVNSLNHVKSIREVEAEQNDLNVPSSPTEDRETSVP
CLPIAVSMCGSLVLTQDSKSNRPQVETTKIIASELFPTQTNTLVVNSLSPDPETQTIIPP
VEESTKTVDQIGPEPACESRRIQSETKVNPETKAFLHYTIPDSLAVAEADLVEGEDSPSS
VVDAIEGWAYPVGSSPEFVSDITFVDDFLPDGDLCDNLVSDADLDAFLTEQSLKNTELRP
MENSTDEGFSEMNGDISGLSDPSQNIGGDDLLEVVRSALNIEAVEPAYSEPERPPSLGVD
QNFVSSGDVALTVVEDTKDSGEANMCSSVCRIPNPSACNNQHPYSGGARPKQLFVHPPKT
LLTKELNDHKRGDFKDVPLAGEQTVNHVQSPGIGERFPNQSLASPGYTYSESIDSSVDLE
EGSESAQLIVNQAVDSTEESVSLDDRLMREESSLGLKQPAWVPDSKALKCMNCQLKFTFT
KRRHHCRACGKVFCGGCCNRKCKLKYMEKEARVCVICFETIHKAQALARMMSPTGPSPNP
NIPSEYCSTIPPLQQAQAAGTLNSPPPTVMVPVSVLKQPGNEAGLPREQKRVWFADGILP
NGEVADTLKLSVGSKRLSQDSSPVTPEPPVPQVQKSLEKEIHDSTATALSDSSEQAPGIP
KAAMKVPNSPASRSPEDDMKHLITGPSDYRMLSTIGECITKTGSLVPDDEEGLPPVVIAT
GERGDDSLVEDRPSASQLMLLLEEGGPNPLTFVLNVNLLVNVKLVTYAAQKCWCFSSNGL
HGVGQPEIVFLLQCLPEESTLPKDIFKLYITIYQDALKGKYIENLGNVTFTESFLGSKDH
GGFLFISPTFQPLNDLYLPDSPFLFGVLIHKLEVPWAKIFPLRLVLRLGAEYSVYPCTLT
SFRFRNPLFRETGHTIMNLLADLRNYQYSLASVEGLLIHMEMGNSYIEIPKGRFNEVMKV
MNSSNEHVISMGACFSMEADSHLVCVQNADGNYQTQANSVPGKTRRITGASFVVFNGALK
ASSGFIAKSSIVEDGLMVQITPETMEALRQAFREKRDFQIPCGKHDSGDLREYVNIHWVE
RASIVNTGIMSPVDGKSLEGVPSIKMQQEAEFESDGKLVKCTEVFYLLKRPEQSLASVLV
AHSQFPKEIAMACCAALCPHLKTLKESGINKLGLRVSTDTDMVEYQAGSGGRLLPQSYMN
DLDTALIPVIHGGSSSPPRSLMEMDFLFFITESLY
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggacagctacttcaaagcagtggtctgcgatctggacaaactactagatgattttgag
caaaacacagatgagcttacagcatctgcaagttattgtgctccagccttcccagctcct
tccctcaactcccactttgtcgctgaatcatctccagaactcgcatctctgcatgaactc
aaaagtcttacctacagcacgcccgctgatgtgtccacctctgcagcagccagtggtttt
caaacaaaacccttaacggaacttgaccttccaactgccgacagcagagcttcaaagaac
attgcacccccttgtctggacaggggtctcaaacctatctgtgacctggttagcaattca
ggatcactcattatcagagccaataaccatgatgcttttcagaagctggatattgttgaa
aatcagttagaggaaggtttgcttgtagactttgatttgcctcctgcatgtgctgcagga
gatgcattgcagttcagcctcagtaatgttcctggtgtacaggtgttttccgagggaggt
ttgggactgcaaggagcgggtcgccttgcaacaggacatttggaaagcctgagcttattg
gacattatcttgccccctgaggctgctgacgaaccagtgaatagaaattcatcttcaaac
actgtccaccaaggacatttagaggaagtccttcaaaatgaaactggtgctcagaacgtc
agggagccaaatgaagaagacggccaggaggatcaagagtttccatgcgatccagagaga
actgagaacggcaccacagtcctttcaaaaactgaatgcagtgaggacagtgtagctgta
aacgggaccctcgattgcacagatgccaaggagctaatccattcaaaggaaaatatgaat
ggtgaagcaaagtttaactcctcattggaaataacagcttgttcatcagacaaaaagcaa
gactgcgaggaagaagtgaacagtttaaaccatgtaaaatccatcagggaggtggaagca
gaacagaatgacctgaacgtgccatctagtcctacagaagatagagagacatccgtgccc
tgtcttccaattgccgtgtccatgtgcggctctttggttttgacgcaagactccaaaagc
aacagacctcaggttgaaaccaccaagattatagccagtgaattgtttcctacccagact
aatacactcgtggtgaacagtctttctcctgaccctgaaacacaaacgattattcctcct
gtggaggaaagtacaaagactgtggaccaaattggtccagagcctgcctgtgaaagccgc
agaatccagtcggaaaccaaagtcaaccctgagacaaaagcattcttgcactacacaatc
ccagacagccttgctgtggcagaagcagatttagttgagggtgaagactcccccagcagt
gttgtggacgccattgaaggctgggcctaccctgtgggctccagccctgagttcgtttca
gacataacgtttgtcgatgactttctcccagacggagacctgtgtgacaacctggtgagt
gacgcagacctggatgccttcttgacggagcaaagcctcaagaacactgagttgaggcct
atggagaattctactgacgaagggttttcagaaatgaatggtgacatttcagggttgtct
gatccttcccagaacattgggggagatgatctgcttgaggttgtcaggagcgccctgaac
attgaggctgttgagcctgcatattcagaaccagagagaccgccatctctgggggtagac
caaaactttgtttcttctggggatgttgccctgactgtagtagaagacacaaaagacagt
ggtgaggcaaacatgtgtagttctgtttgtcggatacccaaccccagtgcttgtaataac
caacacccatattctggaggggcaagaccaaaacaactttttgttcatcctccaaaaact
ctattgacaaaggaattgaatgaccataaaagaggcgattttaaagatgttcctttagca
ggagagcaaaccgtaaatcatgtgcagtcccctggtattggagagcgattcccgaaccag
tctttagcaagtcctgggtatacctactctgagagtatagatagtagcgttgatttggaa
gagggctcggaatctgcccagcttatcgttaaccaggcggtggatagcacagaggaatct
gtttccctcgatgatcggctgatgagagaagaatcaagtctggggttgaaacagcctgca
tgggtacctgattctaaagcactaaagtgcatgaactgccaactcaagtttaccttcacc
aaaaggaggcatcattgtcgggcatgtggaaaagtattttgtggtggttgctgtaaccga
aaatgtaagctaaaatatatggaaaaagaagctagggtttgcgtcatctgctttgaaact
attcataaagcacaagcccttgcgaggatgatgagcccgaccggtccgagtcctaatcct
aatattccctctgaatactgctccaccatccctcccctgcagcaagcccaggcagctgga
actctcaactcccctccgcccaccgtaatggtgcctgtgtctgtgctcaagcagcctgga
aacgaagctgggcttcccagggaacagaaacgggtttggtttgcagatggtattttgcca
aacggagaggtagcagatacattgaaactgtcagtagggagcaagcggttgtctcaagac
tccagccctgtaacccccgaacctcctgtgcctcaggttcagaaaagcctggaaaaggag
attcacgattctacagctacagcgctcagcgattcttcagaacaagcacctggtattcct
aaagccgcgatgaaggtaccgaacagtccagcttctcggagtccagaagatgatatgaag
catcttatcacagggccttcggattacagaatgttatccaccataggggagtgcattacc
aagacgggcagtctggttcctgatgacgaagaggggctgccccctgttgtcatagcaaca
ggggagagaggagatgactcgctggtggaggatcgcccctctgccagccagctgatgctg
cttcttgaggaaggaggtcctaaccccctcacgttcgtgctgaatgtcaacctgctggtg
aatgtcaaattagtgacttatgctgcacagaagtgctggtgcttcagctccaatggcctg
cacggggtgggtcagcctgagattgtgttcctgctgcagtgcctgccagaggaaagcact
ctccccaaagacatctttaagctgtacattaccatctatcaagatgcactaaagggcaag
tacattgaaaatctgggcaacgtgacctttactgagagtttccttggcagtaaggatcac
ggtggattcctgttcatttcgcccacattccagcccttgaatgacctgtacctgccagac
agccccttcctctttggggttctcattcacaagctggaggtgccctgggcaaagatcttc
ccactgaggctcgtgttgagactgggggcagagtacagcgtgtatccttgcactttgacg
agtttcagattccggaacccattattcagagaaactggacacactataatgaaccttcta
gcagacctcagaaattaccagtacagtctggcgagtgtggagggcttgttgatccacatg
gaaatgggcaacagttacattgaaatccctaaggggaggtttaatgaggtgatgaaagta
atgaattcctccaatgagcatgtcatcagcatgggtgcctgctttagcatggaggcagat
tcccacctggtgtgtgttcagaacgccgatggaaactatcagacccaggccaacagtgta
ccaggcaagactaggagaatcactggagcaagctttgttgttttcaatggtgctctgaag
gcctcctcgggatttattgccaaatccagcatagttgaagatggtttgatggttcaaata
acaccggagacgatggaagcattacggcaagcttttagggaaaaaagggacttccagatc
ccatgtggaaaacatgattcaggagatttaagagaatatgtaaacatccactgggtggag
agggcatccattgtaaacacagggattatgagtccagttgatggaaagtccctggaaggg
gttccaagcattaaaatgcaacaggaggcagagtttgaaagtgatgggaagcttgtgaaa
tgtactgaggtgttctatcttctgaagcgccctgagcagtctcttgccagcgttctggtt
gcccacagtcagttcccaaaagagattgccatggcctgctgtgctgccctctgccctcac
ctgaagaccttgaaagagagcgggataaataagctgggactcagagtttctacagacaca
gacatggtggaataccaggcgggttcaggaggcaggcttcttcctcagagctacatgaat
gacctggacaccgcgctcattcctgtgattcacggcggcagctccagcccgccgcgcagc
ctcatggagatggacttcctgttctttataacagaaagcctttactaa
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