KEGG   Polyodon spathula (Mississippi paddlefish): 121312791
Entry
121312791         CDS       T07273                                 
Name
(RefSeq) cullin-1 isoform X1
  KO
K03347  cullin 1
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04110  Cell cycle
pspa04114  Oocyte meiosis
pspa04120  Ubiquitin mediated proteolysis
pspa04141  Protein processing in endoplasmic reticulum
pspa04310  Wnt signaling pathway
pspa04340  Hedgehog signaling pathway
pspa04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121312791
   04120 Ubiquitin mediated proteolysis
    121312791
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    121312791
   04340 Hedgehog signaling pathway
    121312791
   04350 TGF-beta signaling pathway
    121312791
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    121312791
   04114 Oocyte meiosis
    121312791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pspa04121]
    121312791
Ubiquitin system [BR:pspa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     121312791
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 IntS11_C
Other DBs
NCBI-GeneID: 121312791
NCBI-ProteinID: XP_041100489
LinkDB
Position
3:17898584..17928016
AA seq 781 aa
MSSNRSQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSN
QARGAGVPPSKPSKKAQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLSVYKEYFESQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAA
LNVSTSDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS
SKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLV
HQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLSNSEPLDLDF
SIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCF
KNRYTLQASTFQMAILLQYNTEDIYTVQQLTDSTQIKIDILVQVLQILLKSKLLVLEDEN
ANVDEVEFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAI
VRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYL
A
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgtcatcaaacagaagccaaaacccacatgggttgaaacagattgggctggaccagatc
tgggatgatctccgggcagggatacagcaggtctacaccagacagagcatggcaaagtca
cgctacatggaactctacactcacgtttataactactgtaccagtgtgcatcagtcgaac
caggctcgaggtgctggggtccctccttcaaaaccttccaagaaggcacagacccccgga
ggggcgcagtttgtgggactggaactctacaagcgactaaaggagtttctcaagaactac
ttgacaaatcttctcaaggatggggaagacctgatggatgagagtgtgctaaagttttac
acccagcaatgggaagattacaggttctcaagcaaagtactgaacggtatctgtgcctac
ctcaaccgacactgggtccgccgtgaatgtgatgaaggacgcaaaggaatctacgaaata
tactcgcttgccttggtgacttggagggaatgcttatttagacctttaaataaacaggtc
acaaatgccgtattgaagctgatagaaaaggaaagaaatggagaaaccatcaacacgaga
ttgatcagtggagttgtccagtcctatgttgaacttggtttaaatgaggacgatgccttt
gcgaagggacccacattgtccgtgtacaaagaatactttgagtctcagtttttggcagac
acggagcggttctatacaagggaaagcacagagttcttgcaacaaaacccagtcacagag
tacatgaaaaaggcagaggcgcgcttgctggaagagcagcgccgggtccaggtctatctg
catgaaagcacgcaagatgagctggcgaggaagtgtgagcaagtgctgatcgagaagcac
ctggagatcttccacacagagttccaaaacttgctagatgctgacaaaaatgaagatttg
ggccggatgtacaaccttgtgtccagaatcacagatggtctgggagagctgaagaaactt
ctcgagacacatattcacaaccagggactagctgccattgagaagtgtggggaagccgct
ctcaatgtaagtacttcagatcccaaaatgtatgtacagactattttggatgttcataag
aagtacaatgcactagtaatgtcggcattcaacaatgatgctggttttgtggctgcacta
gacaaggcttgtggtagattcatcaacaacaacgcagtgacaaagatggctcagtcatca
agcaaatcccctgagctgttggcaagatactgtgactccctattaaagaaaagctccaag
aatccagaagaagccgagctggaagataccctgaatcaagtgatggttgtctttaagtac
attgaggacaaagatgtgttccaaaagttttacgccaagatgctggcgaagagactggtt
catcagaacagtgctagtgacgatgcggaggccagcatgatctccaaacttaagcaagcc
tgtggctttgaatacacttccaaactgcagcgaatgtttcaggacattggagtcagcaaa
gacttaaatgaacagtttaaaaaacatctgtccaactctgagccattagacttggatttc
agtattcaggttctaagctcaggctcttggcccttccagcagtcctgcacatttgcttta
ccatctgagttggagaggagttaccaaagattcacagccttttacgccagcagacacagt
ggacgcaagctaacctggctctatcatctgtccaaaggagagctggtcacaaactgtttt
aagaatcggtacactttgcaggcatccacgttccagatggcaatcctcctgcagtacaac
acagaagacatatacactgtacagcaactgacagacagcacgcagattaaaatagacatt
ctggttcaagttttacaaatcttgttgaagtccaaattgctggtattggaagatgaaaat
gcaaatgttgatgaggtggagtttaagcctgacactttaataaaacttttccttggatac
aaaaataaaaaactgcgagtcaacatcaacgtgccaatgaaaactgaacagaaacaggag
caggaaactactcacaagaacatcgaggaggacaggaaactcctgatacaggctgctatt
gtgaggatcatgaagatgaggaaagttttaaaacaccagcaacttcttgcagaagtacta
aaccagctgtcctccagatttaaacccagggttcctgtgataaagaaatgcatcgacata
ctgatagagaaggaatacttggaacgtgtcgacggggaaaaggatacttacagctacttg
gcttaa

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