Polyodon spathula (Mississippi paddlefish): 121312796
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Entry
121312796 CDS
T07273
Symbol
eef1db
Name
(RefSeq) eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) isoform X1
KO
K15410
elongation factor 1-delta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pspa03012
]
121312796 (eef1db)
Translation factors [BR:
pspa03012
]
Eukaryotic type
Elongation factors
121312796 (eef1db)
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Gene cluster
GFIT
Motif
Pfam:
EF1_GNE
EF-1_beta_acid
Striatin
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
121312796
NCBI-ProteinID:
XP_041100500
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Position
3:18301416..18318405
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AA seq
734 aa
AA seq
DB search
MNMQPHPYLLKTVWMDKPKHDEAESRYHEECTKSASLEGGEKTRVEKQEESFTTSSGWEV
QVSSPESLNGEPTKKKQRRRKRSPKIKSQQAGLGQALTAMMSETIWFEKSRFEEAECAYQ
KKLADYCSHSALPKALEPKLQAKSNVAHCRNRDVVACHHVVDCVWVNKPAFDDAECSFME
RLLPCSTPTSLAIAPLTAGPTPAAMQIPDDEGYLTATPTPATPGLSFLDQSNNTAPVLPA
PTTHSINGMPQIPSCLRQLASGVWLEKPIYDQAEKSYYERLCDGFPPAASMQKGRKNRRN
KKVSKEAGACNHASGSASNSGFGFSAMVADSNGSILQGTEDDDGRLILKAKEAESNAISV
SLFVHGHVAKASVRFFLHQDSERVWLSKPLFDAAEKRHYEAVSDQASRSSTRLTVETSMP
GLAAPAPRQQANTMSAEHLAQENIWFDKYRYDDAERRYYEQLNGPISATPAGRTQTAQEN
GANTILQDIARARENIQKSLAGLKTTLHPTGTPSVSAKHPRHSARSSAGCTAGEQSELVS
RISSLELENRSLYSVVEDLRLAISKLETRVSQLEKSPAGGRPTLAAAAAPCTKSLQVEVK
KEEVEDDDDDIDLFGSDEEEDAEAARIREERLQQYAAKKAKKPALIAKSSILLDVKPWDD
ETDMVKMEECVRSVQADGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEEITKFE
DLVQSVDVAAFNKI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcagccgcacccctacctgctgaagactgtttggatggacaagcccaaacac
gacgaggcagagagtcgctaccatgaggaatgcaccaagtctgcttcgctggagggggga
gagaaaactagggtcgagaagcaggaggagagcttcaccaccagtagtggttgggaggtt
caggtatcttcaccagaaagcctcaacggagagccgaccaagaagaagcaaagaagacgc
aaacgatcgcctaaaatcaagagccagcaggccgggcttggccaggcgttgactgcaatg
atgtctgaaaccatctggtttgagaaatcccgttttgaggaagcagagtgtgcttatcag
aagaagctggcggattattgctcccactctgctcttccaaaggccctggagcctaagctc
caggcaaaatctaatgtggcacactgcagaaacagggatgtcgttgcctgccaccatgta
gtggactgcgtctgggtcaacaagcctgcttttgatgacgcagagtgcagtttcatggag
agattgcttccttgctccaccccaacctctctggctattgcgcccctcacagctggtcca
acacctgctgccatgcaaatcccggatgacgagggttacctgaccgctaccccaacgcct
gctacgccgggtctttccttcctggatcagtcaaacaatactgctccggttctacccgct
cccacaacccattccatcaacgggatgccccagatccccagctgcctacgacagctggcc
tctggggtgtggctggagaagccaatatacgatcaggctgagaagagttactatgaacgc
ctctgcgatggctttccccctgcagcctcaatgcagaaggggaggaagaacaggaggaac
aagaaggtcagcaaggaagccggagcatgcaaccatgcatcggggtccgcgagtaatagc
gggtttggtttctctgcgatggtggctgacagtaatggcagcattttgcaagggaccgaa
gatgatgacggacggctcattctaaaggctaaagaagcagagagtaatgcgatatctgtg
tctctctttgtccatggccacgttgccaaggcatcggttcggttcttcctgcatcaggac
agcgaacgtgtgtggctcagcaagcccctgtttgatgccgcggagaagaggcactacgaa
gcagtctctgatcaagccagcaggtccagcactagactgactgtggagacctcaatgcca
gggctggctgctccggcacccaggcagcaagcaaacaccatgagcgcagaacacctggcc
caggagaacatctggttcgacaagtaccggtacgacgatgccgagagacggtactacgag
cagctgaacggacccatctccgccacccctgcgggccgcactcagactgcacaggagaac
ggagcaaatacaatcctgcaagacattgccagagccagggagaatatccagaaatcgtta
gccggactgaagaccaccttacaccccactggaaccccctctgtctctgcaaagcacccc
cgccactctgctcggtctagtgctgggtgtaccgctggagaacagagcgagctggtgtcc
cggatcagcagcctggagctggagaaccgcagtctgtacagcgtggtggaagacctgaga
ctggccatctcaaagctggaaactcgcgtgtcacagctggagaaatcaccagcagggggc
agacctacccttgcagcagcagcagcaccctgcaccaagtccctgcaggtggaggtgaaa
aaggaggaggtggaagatgatgatgatgacatcgacctgtttggcagtgacgaagaggag
gatgctgaggcagctcggatcagggaggagagactgcagcagtacgcagccaagaaggca
aagaagcctgccctcattgccaagtcctccatcctgcttgacgtcaagccgtgggatgac
gagacagacatggtgaagatggaggagtgtgtgcgctcggtgcaggcggacggtctcttg
tggggctcctctaagctggtcccagtagggtacggcatcaagaagctgcagatccagtgc
gtggtggaggacgacaaggttggcacagacatgctggaagaggagatcaccaagttcgag
gacctcgtgcagagtgtcgacgttgctgctttcaacaagatctaa
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