Polyodon spathula (Mississippi paddlefish): 121312819
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Entry
121312819 CDS
T07273
Name
(RefSeq) attractin-like
KO
K24332
attractin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pspa04091
]
121312819
Lectins [BR:
pspa04091
]
C-Type lectins
Others
121312819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
EGF_LMN_ATRN
Kelch_5
Kelch_4
CUB
PSI
Kelch_2
Kelch_6
EGF_TEN
NANM
EGF_Teneurin
EGF_laminin
PSI_integrin
TMEM100
DUF7015
DUF4842
Motif
Other DBs
NCBI-GeneID:
121312819
NCBI-ProteinID:
XP_041100595
LinkDB
All DBs
Position
1:108166959..108297769
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AA seq
1372 aa
AA seq
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MDVEKRWACRLVSRSRNRAGLPGLVWGKLPLVLVVVASVLSGLGSPAEGKECDKPCLNGQ
CNPTVGSCICEPGWAGDQCQHCSGRFRLTGSSGYLTDGPGNYKYKTKCTWLIEGQPNTIL
RLRFNHFATECSWDHLYVYDGDSIYAPLLAAFSGLIVPEKYGNETVPEVVSKSGYALLHF
FSDAAYNLTGFNISYRINTCPNNCSGRGECKLGSGSRGEFCECAAHWKGEACDIAYCMED
CGFPQRGVCHANTTKRCFCNAGWQGPNCSIPMPANESFWTREEYPVRSLARASHKSVVND
GIMWVIGGYVFNYSDYKMVKAYALSSQEWLPLNQSVNSVIGRYGHSLALHKGKIYMYGGK
MDSSGNVTDELWVFHIGNQSWVQVSPKAKEQYAVVGHSAHKVRLADDSVVMLVIFGHCPL
YGYTSKVQEYNLDTNTWSILKTNGALVQGGYGHSSVYDPKTRAIYIHGGYKAFSANKYGL
ADDLYKYQVDSRMWTILKDSGFFRYLHTAIIMSGTMLVFGGNTHNDTSMSNGAKCFSSDF
MAYDIACDEWSVLPRPDLHQDVNRFGHSAVYSNSTMYVFGGFNSLLLSDVLMFAPASCAA
LSSEAACTAARPGIRCLWNASLDRCLSWEEASPKEELQVLFTCPAKAYADSEKCDQYTDC
YSCTANTNGCQWCTNQCISMSSNCTAVPGPIVEYETCPKDNPEYVCNKKTSCKSCAMDQN
CQWEPRNQECIALPDNICGENWHLVGNSCLKFTTAKDNYDNAKLSCRNSNAVLASLTSQK
EVEFVLKELQIMHVLYKATVTPWVGLRKINVSYWCWEDMSPFTNTSLQWLPGEPSDAGFC
GYLAEPSHTGLKAATCVNPVNGSLCERPANHSAKQCRTPCALRSSCSECTSGSSECMWCS
NMKQCVDSNAYVASFPFGQCMEWYTMNSCPPDNCSGYRTCGQCMDQSGCGWCTDPTNTGK
GQCIEGSYRGPVQASTPGSYQEPALNVTMCPTENKYNWSFIHCPACQCNGHSKCLNESAC
EKCEDLTTGKHCETCISGYYGDPTNGGTCQGCKCNGHASICNSQTGKCFCTTKGIKGDKC
HLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQDDDRYYTAINFVATPEEQNRDLDMFI
NASKNFNLNITWATSFAAGTQAGEEVPIISKSNIKEYKDSFSNEKFDFRNNPNITVYVYV
SNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLL
REMQQMASRPFATINVALETDDEPPDLIGGSIKNVPKPITLEPCFGNKAAVLSIFVRLPR
GSGGIPPPGQSGLAVASALVDVSQQMPLAYKEKSGATRNRKHQPQAQPGTCI
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagaaaagcggtgggcctgcaggcttgttagccgcagtcgtaatcgagcaggt
cttcccggtctggtgtggggcaagctgcctctggttctggttgtggtagcatcagtactg
tctggactcggttctccggccgagggcaaggagtgcgacaagccgtgcctgaacgggcag
tgcaacccgactgtcggtagctgcatttgcgagcccggctgggccggggatcagtgccag
cattgcagtgggagattcaggttaactggctcctcgggatacctcacagatgggcctggg
aattacaaatacaaaaccaagtgcacctggctgatcgagggccaacccaacactatcctg
aggctgaggttcaaccactttgcgacagagtgcagctgggaccacttgtatgtgtacgat
ggggactctatctacgctcctttgctggccgcattcagcgggctgatcgtccctgagaag
tacggtaatgagactgttcccgaggtggtctccaaatccggctacgcgctgctgcacttc
ttcagcgatgctgcctacaacctgaccggcttcaatatctcctacagaatcaacacctgc
cccaataactgctctggccgtggagagtgcaagcttggcagtggcagcagaggcgagttc
tgcgagtgcgcggcgcactggaaaggagaggcgtgtgacatcgcgtactgcatggaggac
tgcggtttcccccagcgcggagtgtgccatgccaacaccaccaagcgctgcttctgcaat
gcgggctggcaaggtcccaactgctccattccgatgccagcaaacgagtcattttggact
agagaagagtacccagtccgcagcctggcacgggcctcgcacaagtctgtggtgaacgat
ggcatcatgtgggtgattggaggctacgtgttcaactattccgactacaagatggttaaa
gcatacgctctgagctctcaagagtggctgcctctaaaccagtcggtaaactctgtcatt
gggagatacgggcactcgctggcactgcacaagggcaagatatacatgtacggtggtaag
atggactccagtgggaatgtcactgacgagctgtgggtgtttcacattggaaaccagtca
tgggtacaggtcagccccaaggccaaggagcagtacgccgtggtggggcactctgcgcac
aaggtgcggctggccgatgacagcgtggtcatgctggtcatctttggacactgccctctg
tacggctacaccagcaaggtgcaggagtacaacttggacacaaacacatggagcatcctg
aagactaacggtgccctggtgcagggaggctacgggcacagcagtgtctacgaccccaaa
accagagccatctacatccatgggggctacaaggcctttagcgccaacaagtacgggctg
gcagacgacctctacaagtaccaggtggactcccgcatgtggaccatcctgaaggacagt
ggtttcttccgctacctccacacggccatcatcatgagtgggaccatgctggtgttcggg
gggaacacgcacaacgacacttccatgagcaacggggccaagtgcttctcatccgacttt
atggcctacgacattgcttgtgacgagtggtcggtactgcccagaccagatttgcaccaa
gatgtaaaccgttttggacactctgcagtttacagcaacagcaccatgtacgtgttcgga
ggtttcaacagcctgctcctgagtgatgtgctgatgtttgctccagcgagctgcgctgcg
ctctccagcgaggctgcctgcaccgcagccagacctgggatccgctgcctctggaatgcc
agtctggaccgctgtctatcctgggaagaggccagccccaaggaggagctgcaggtcctg
ttcacctgtcctgccaaagcatatgctgacagtgagaagtgtgatcaatacacagactgc
tacagctgcacagccaacaccaacgggtgccagtggtgcaccaatcagtgcatctcaatg
agcagcaactgcacagctgtgccaggccccatcgtggagtatgagacctgcccgaaggat
aacccagagtatgtttgcaacaagaagacgagctgcaagagctgtgctatggaccagaac
tgccagtgggagcctcgaaaccaggagtgcatcgccttaccagataatatctgcggggag
aactggcatcttgttggaaactcctgcctgaagttcaccacagccaaggacaattacgac
aacgccaagctgtcctgccgaaacagcaacgcagtcctggcctcgctcacctcccagaag
gaggtggagtttgtcctcaaggagctgcagatcatgcatgtgctgtacaaagcgaccgtc
accccctgggtgggattgcggaagatcaacgtctcgtactggtgctgggaggacatgtcc
cctttcaccaacacgtccctccagtggctgccaggggagcccagtgatgctgggttctgt
gggtacctggctgagccctcccacaccggcctgaaggcagccacctgcgtcaaccctgtc
aatggcagcctgtgcgagcgcccagcgaaccacagtgccaagcagtgccgcaccccctgc
gccctgcgctcgtcctgcagtgaatgcaccagcggcagctctgagtgcatgtggtgtagc
aacatgaagcagtgcgtcgactccaatgcgtatgtggcctccttccccttcggacagtgc
atggagtggtacaccatgaacagctgcccaccggataactgttctggctaccgcacgtgt
ggccagtgcatggaccagtctggttgcggatggtgtacggaccccactaacactgggaaa
gggcagtgtatagagggctcgtaccgaggtccggtccaggcctcaacacccggctcgtac
caggaaccagcactcaacgtcaccatgtgtcccactgagaacaagtacaactggtctttc
attcactgtccagcgtgccagtgtaatggccacagcaagtgcctcaatgagagtgcatgt
gagaagtgtgaggacctgacaacgggcaaacactgcgagacctgcatctccgggtactat
ggagaccccaccaacgggggcacctgtcagggctgcaagtgtaacggccacgcctccatc
tgcaactcccaaactggaaagtgcttctgcaccaccaaggggatcaaaggagacaagtgt
cacctatgtgaggtggagaaccgttaccaaggcaatcctctcaagggtacctgttactat
accctcctcattgactaccagttcaccttcagtctgtcccaagatgatgaccgctattac
acagccattaacttcgtcgctacacctgaagagcaaaaccgggacctggacatgtttatc
aatgcatctaaaaacttcaacctgaacatcacctgggccactagttttgcagctggcaca
caggcaggagaggaggtccccatcatttccaagagcaacatcaaggagtacaaggacagc
ttttccaacgagaagtttgacttccgcaacaaccccaacatcacagtctatgtgtatgtc
agcaacttcacttggcccatcaagatacagattgccttctctcaacacagtaacttcatg
gacctggtgcagttctttgtgacgtttttcagctgtttcctgtccctgctgttggtggcg
gcagtcgtgtggaagatcaaacagagctgctgggcgtcacggaggagagagcaactcctg
cgtgagatgcagcagatggccagccgccccttcgccaccatcaacgttgctttggaaacg
gatgatgagccgcccgacctcattggtgggagcatcaagaacgtccccaagcccataacc
ctggagccctgcttcggaaacaaagcggccgtgctgtccatattcgtcaggttaccacgg
ggatcaggagggattcccccaccagggcagtcaggccttgccgtagccagcgcactagtg
gacgtgtcccagcagatgcctctcgcgtacaaggagaagtcgggagccacgaggaaccgg
aaacaccagccccaagcacagccagggacctgcatctga
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