Polyodon spathula (Mississippi paddlefish): 121312829
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Entry
121312829 CDS
T07273
Symbol
asb10
Name
(RefSeq) ankyrin repeat and SOCS box protein 10 isoform X1
KO
K10332
ankyrin repeat and SOCS box protein 10
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121312829 (asb10)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121312829 (asb10)
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Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_5
Ank_4
SOCS_box
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
121312829
NCBI-ProteinID:
XP_041100572
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Position
3:complement(20126595..20139702)
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AA seq
468 aa
AA seq
DB search
MSHSSFAFTSTALRSLRLEEDLLDRQMYKKRLGAPHLNQYLLKKEVRCKEEGKKKMNSVV
EQPEVCRDVVVQNAIFTGDLDTLKQLFPKGTSVNFVIESRGEDLRWISNKFGLWSLTYEQ
ELTTPLHITASRGYTDCLKHLLTRGSEVDIAPGGRTALHDACSNATTECAKLLLTYGASA
NSVTEDGFMPLHLCTTPQSFQCAKLLLQFGAHVNGRSLDDDDTPLHLAARYGLEEHVDLY
LRYGAAIEKQNDEGQTPLNAACSQPHSAEEMERYYHICQRLVEAGANIFTSDQDKQTPLH
MACKNVNPKVVELLLQKGSNVNIMSYSSNAPMHNILKGVAFKLEHQPELIVRSLLNYGSI
RVWPEALPKVLKYCCPSPRTIEALMNAYDRLKITDAWLEAVSPEVFQKHRYFYESLFALA
NRPRSLQHLVRCKLRKYLEGRLHQAVPKLGLPTFLQNYLLLHFRDCLH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacagcagttttgccttcacgtcgacggctctgcgctctttacgtttggaagag
gacctgttggataggcagatgtacaagaagagactaggcgccccacatctgaaccagtac
ctgctaaagaaggaggtcaggtgtaaagaggaaggaaagaaaaagatgaacagcgtggtg
gagcagccagaggtgtgccgggacgtggtggtgcagaatgctatcttcactggcgacctc
gacacactgaagcagctcttccccaagggaacatccgtcaactttgtcattgagtctcgc
ggggaggacctgcgctggatcagcaataagttcggcctgtggtcattgacatacgagcag
gagctgacgactcctctgcacatcacagcgagccgcggctacaccgattgcctgaagcac
ctgctgacgagaggctccgaggtagacatagccccggggggaaggactgccctccacgat
gcttgcagcaacgccaccacagagtgtgccaagctgctgttgacttacggagcgagtgcc
aactcagtcacagaagacggtttcatgcccctccatttgtgcaccaccccacagtcattc
caatgtgccaaactcctgttgcagtttggtgcccacgtgaatgggcgcagcttggacgat
gacgacactcccctgcacttggcagcgcgctacggcctggaggagcacgtcgatctgtac
ctgaggtatggtgcggccatagagaaacagaacgatgaggggcagacccctctcaatgct
gcctgctcgcagccacacagtgcagaggaaatggaacgctactaccatatctgccagcgg
ctggtcgaggccggggccaacatcttcaccagtgaccaggacaagcagacccctctgcac
atggcctgcaagaacgtcaaccccaaagtggtagagctgctgttgcagaaagggtccaac
gtgaatattatgagctacagcagcaacgcgcccatgcacaacatccttaaaggggtggcc
ttcaagcttgagcaccagccagagctcattgtccgctcccttctcaactatggctccatc
cgcgtctggcccgaggcactgcccaaggtactgaagtactgctgtccttctcccaggact
attgaggctctgatgaacgcctacgaccgcctcaaaatcacagacgcctggttggaggct
gtttctccagaagtcttccagaaacatcgttacttttatgagtcactctttgccctggct
aacagaccccggtccctccagcacctggttcgctgcaagctgaggaaatacttggagggc
cggcttcatcaggcggtgcccaagcttggcctgcccaccttcctacagaactacctgctg
ctgcacttccgtgactgcctgcactaa
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