Polyodon spathula (Mississippi paddlefish): 121312861
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Entry
121312861 CDS
T07273
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 16-like
KO
K08630
a disintegrin and metalloproteinase with thrombospondin motifs 16 [EC:3.4.24.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121312861
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121312861
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GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
ADAMTS_CR_2
PLAC
TSP1_spondin
TSP1_CCN
Reprolysin_5
ADAMTS_CR_3
Reprolysin_3
Reprolysin_2
Reprolysin_4
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
121312861
NCBI-ProteinID:
XP_041100647
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Position
3:complement(21946842..22019440)
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AA seq
1239 aa
AA seq
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MALLHFLGKRTHLRTAFSVLQFTFTLAIYLCASETVQVRHEDDNSDRSLCQSNLLEFLEL
AQSTEYEIVAPYEVDHKGKYISHAVAHHHRRKRSIQNRTEQSVHFRLHGLGQDFHLELQS
SGSLFAPGFTIQTLGKSGTTFVETYQHEDLCFYQGSLRSKINSSVAISTCKGMSGLIRTR
DADYFLKPVPQHLALKENFTAPTSHQPHILYKRSTDSQRHLVDNEVIIARRPKAMGYYSE
EPRRQHPHNNYKHGQLQKQHFCGRRKKYMPKPPEEDVYILPDEYAYLSRSKRTVIFKSQR
NKKLNVETLVVVDRKMMQNHGNENITTYVLTILNMVSALFKDGTIGGNINIAIVGLILLE
DDQAGLVINHHADHTLNSFCKWQSGLSGKDGSRHDHAILLTGLDICSWKNEPCDTLGFAP
ISGMCSKYRSCTINEDTGLGLAFTIAHESGHNFGMIHDGEGNVCKKSEGNIMSPTLAGHN
GIFSWSACSRQYLRRFLSSAQATCLADEPKSVREYKYPDKLPGELYDADTQCKWQFGEKA
KLCTLDFKKDICKALWCHRVGRKCETKFMPAAEGTVCGPDMWCRRGQCLNHGDEGPGSVD
GHWSVWSGWSSCSRSCGAGVTYRERHCNNPSTMYGGKFCEGSSRAYKLCNVHNCPLGSID
FRTKQCAEFNSKQFRGWYYNWKPFTQVSEQELCKLYCSAEGFDFFFALSSKVKDGTSCSE
SSSNVCIDGVCELVGCDHVLGSSAVLDACGVCKGNNSTCKMSKGQYHKQHYTNQYHSVVT
IPAGARSIRVYEMNSSTSYLAVRNSYHKYYLNGYWTVDWPGRHTFSGTVFDYKRPYSRPE
SLAATGPTNETLVVEILLQGRNPGVGWEYTLPKPDGDKMMLPKHNYTWAIVRAECSVSCG
GGQMTTKASCYRNLRVQVRMSFCNPKTRPMTGLVSCNAQACPPSWNVRDWGECSRSCGSG
EQIRQVLCTQKVNYNEMETVTDTKCPQPVPLRRQTCNPHNCPPAWSTGPWSECSRKCGKG
LKKRTVVCKSTNSTPRAQVLPDSSCLAELKPKSQEACMVKLCQKNRKLLWFVSTWRECSV
TCGKGIQKRLLTCAEKDVAGKHKELVPKRCQLVQKPDVQLERECNLAACPRLVTHTVTNS
ARARWYSSPWSQCTVACGGGVQARSVQCLAHGMPSSGCLLHQKPAMSQACNTNFCPEPEK
KDVPCKDYFNWCYLVPQHGVCNHKLYGKQCCKSCSQSNL
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggctctcttgcattttttaggaaagaggacacatttgaggacagctttttctgtattg
cagtttacctttacattggctatatatttgtgtgccagtgagacagtgcaagtcagacat
gaagatgacaatagcgataggtctctctgtcagtccaacctgttggagttcctagaattg
gcacaaagtactgaatatgaaattgtagctccatatgaagtcgaccacaaagggaaatac
atctctcacgcagtcgcccatcaccacagaaggaaaagatccattcagaacaggacagag
cagtctgttcatttcagactacatggcttagggcaggactttcatttagaacttcagtct
tcaggtagcttgtttgcacctggttttacaatacagacactgggaaagagtgggactaca
tttgtggagacttaccagcatgaagacctttgcttttatcaggggtcgttaagatcgaag
atcaactcttcagtagcaatttctacatgtaaaggcatgtcaggtttaataaggacacgg
gatgcagactattttctgaagcctgtacctcagcaccttgcacttaaagagaactttaca
gctcctaccagccaccagcctcacatcctttacaagaggtccacagacagccagaggcac
ttagtagacaatgaggttataattgctagaagacctaaagccatgggatactacagtgaa
gagcctcgtcgccaacatccacacaacaactacaagcatgggcagctgcagaagcaacat
ttctgtggaaggcgcaagaaatatatgcctaaacctccagaggaggacgtctacattttg
ccagatgaatatgcatacctgtccagaagcaaacggacagtcatattcaagtcccagaga
aacaagaagctgaatgtggagaccctggtggtggtggatagaaagatgatgcagaatcac
ggaaatgaaaatataactacatatgttctgactatactaaacatggtgtctgcactgttc
aaagatggaacaataggaggaaacataaatattgcaattgtgggcctcatacttttggaa
gacgatcaggcagggctggtcatcaatcaccatgccgaccacactttgaacagcttctgt
aagtggcagtcagggctgagtgggaaggatgggagccgccacgaccatgccattctgctg
accgggctggatatctgctcctggaagaatgagccctgtgacactttaggttttgcacca
atcagcgggatgtgcagtaaatatcgcagttgtactatcaacgaagacactggacttgga
ctggctttcactatcgcacatgaatcgggtcataactttggcatgattcatgatggtgaa
ggaaatgtttgcaaaaagtctgaaggcaacatcatgtctccaacactggctggccacaat
gggatcttttcatggtctgcatgcagtcggcaatatcttcgcaggtttctgagctctgcc
caggccacctgtcttgcagatgagcccaagtctgtgagggagtacaagtacccggataag
cttccaggggagctgtatgatgcagacacccagtgcaagtggcagtttggggaaaaggcc
aagctctgcacattggatttcaaaaaggacatttgcaaagcattgtggtgccaccgggtt
ggcagaaaatgtgagaccaagttcatgccagctgctgagggcactgtttgtgggcctgat
atgtggtgtcgacgtggtcagtgtttgaaccatggagatgaaggccctggctctgttgat
ggtcactggtctgtctggtcaggttggtctagttgttcaagaagctgtggggcaggggtg
acctatcgagagcggcactgcaataatccaagtacaatgtatggtgggaagttctgtgag
ggctcttctcgtgcatacaaactttgcaatgttcataactgccctttaggcagcattgac
ttccggaccaaacagtgtgcagaattcaacagcaagcagttcaggggctggtattacaac
tggaagccatttactcaagtcagtgagcaggagctgtgtaaactgtattgttccgcagaa
ggctttgacttcttctttgccctctcaagtaaagtgaaagatggtacttcatgttcagag
agcagttcaaatgtgtgcattgacggagtatgcgagcttgttggctgtgaccatgtgttg
ggctccagcgctgtgctggatgcctgtggtgtctgcaaaggcaacaactcaacttgtaaa
atgtccaagggccagtaccacaaacagcattacacaaatcaataccacagtgtagttacc
attccagcaggagcccgcagcattcgcgtgtatgaaatgaacagctccacctcctacttg
gcggtgagaaactcctatcacaagtactacctcaacgggtactggactgtagactggcct
ggaaggcacacattttctgggactgtgtttgactacaagaggccgtacagtcgacccgag
agtctcgcggccacaggacctacaaacgagactttagtggtagagattctccttcagggc
agaaatccaggggtcggttgggaatacactcttccaaaaccagatggtgataagatgatg
ttaccaaagcacaactacacatgggccatagtccgagctgagtgctcagtgtcctgtggg
ggaggccagatgaccacgaaagcatcttgttaccgcaacttacgcgtgcaagtgagaatg
tccttctgtaaccccaagactcggcctatgactggactggtctcctgtaacgcacaagct
tgccctccgagctggaatgttagagactggggcgagtgcagtcgcagctgtggaagtggt
gagcagatccggcaagtcctctgcacacagaaggtgaattataacgagatggagacggtg
actgacacaaagtgtccacagccggtcccattgcggagacagacctgtaacccccacaac
tgcccccctgcctggagcacagggccctggtctgagtgctctcgtaaatgtggtaaagga
ctgaagaagaggacagtggtctgcaagagtactaactccactccaagggctcaggtactt
ccagacagctcctgcttagctgagctcaaacccaaatcccaggaggcctgcatggtgaaa
ctctgccagaagaatcgcaaactcctgtggtttgtttccacgtggagagagtgttctgta
acatgtggcaaaggaatacagaagaggctgttgacgtgtgcagagaaggatgttgcaggg
aaacacaaagagctggttcccaagagatgccaacttgtgcagaagcctgatgtacagctg
gagagggaatgcaacctggctgcctgtcccaggctagtcactcacactgtcaccaacagt
gcccgggccagatggtactcctcaccctggtctcagtgcacagtggcctgtggaggtgga
gttcaggcacgttcagtgcagtgcttggcacatggaatgccctcctcaggttgcctcctt
catcaaaagccagctatgtctcaggcctgtaacaccaatttctgccctgagcctgaaaaa
aaagatgtgccatgcaaggattacttcaattggtgttacctggtcccccagcatggagtt
tgcaaccacaagctgtatggcaagcagtgctgcaaatcctgctctcagtcaaatttgtaa
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