Polyodon spathula (Mississippi paddlefish): 121312862
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Entry
121312862 CDS
T07273
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121312862
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121312862
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
121312862
NCBI-ProteinID:
XP_041100648
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Position
3:complement(22422975..22428453)
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AA seq
457 aa
AA seq
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MSFPQLGYPQYLSATQAVYGGERPGVLTASARGGSTEIGANPAATAAAVTSMLGMYANPY
AAHNYSAFLPYTSADLALFSQMGSQYELKDNAGVHPATFAAHTSPAFYPYGQFQYGDPAR
PKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGARDKDDEDGNIFGSDNEGDVEKNEDDEEIDLESIDIDKNDGEQSNEEDEEKLESRD
HVQLVESMEKRQDLTVQAPHGYDKPKDIISVVKEPSESSNTRMLSPSGQGNFQIPSNNKP
KIWSLAETATSPDSSQKPLSPSTPPNHSSPQIQHPAFLSNHGLYTCQIGKFHNWTNGAFL
SQNSLLNVRSFLGVNHHHHNHHLHSQQQHTSVLTSTMAALSSDKSSESSSPKHIEQESVP
QTESPTQPLKSSFQPTHDSPRNQQEAAQRVLTALSSA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttccccagctgggctaccctcagtatttaagtgccacccaggcggtgtatgga
ggcgaacggccgggagttctgactgcctctgcaaggggaggaagcactgaaatcggggcc
aatccagctgccacagccgctgctgtcacctcgatgctgggcatgtacgcgaacccttac
gcagcgcacaattacagtgcttttcttccttacaccagtgccgatctagctctcttctct
caaatgggctcccaatatgaattgaaggataacgccggtgttcatcctgccacatttgct
gctcacacttccccagccttttatccttatggacagtttcaatatggggaccctgccaga
cccaagaatgccacgagggagagcacgagcaccctcaaggcctggctcaatgaacacagg
aaaaacccgtaccccaccaaaggagaaaagatcatgctggccatcatcaccaagatgacc
ctgacccaggtctccacctggttcgccaatgccaggagaaggctgaagaaggagaacaag
gtgacctggggtgccagggacaaagatgacgaggatggcaatatctttggcagtgataat
gagggtgatgttgaaaagaatgaagatgatgaggaaatcgacttggagagcatagacatc
gacaagaacgacggggagcaaagcaacgaagaggatgaggagaaactggaaagcagggat
catgtgcagctggtggagagtatggagaaaagacaagatttaactgtgcaggcaccacat
ggatatgataagcccaaagatattatatcagtggtcaaagagccatctgaaagcagtaat
acaaggatgttatctccaagcggacagggcaatttccagataccatcaaacaacaaacct
aagatctggtccttagcagagaccgccactagccccgatagttctcaaaagcctttgtca
ccttctacacctcccaaccattcctcaccccagatacaacacccagcttttctctccaac
catggactatacacttgccagattgggaagttccacaattggacaaatggtgctttcctt
agccaaaattccctgttaaacgtgaggtcttttctgggagtaaatcaccatcaccataat
caccatcttcattcccagcagcaacacacttcagtactcacatcaactatggcagcactg
agcagcgacaagtcttcagagagctcaagtccaaaacacatagaacaggaaagtgttcca
cagaccgaatccccaacacagccattaaaatcgtcatttcagcccacccatgacagtccg
aggaatcaacaagaggcagcacaacgtgttttaacagctctttcttcggcctga
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