Polyodon spathula (Mississippi paddlefish): 121312863
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Entry
121312863 CDS
T07273
Name
(RefSeq) iroquois-class homeodomain protein irx-2-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121312863
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121312863
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
DUF7365
Motif
Other DBs
NCBI-GeneID:
121312863
NCBI-ProteinID:
XP_041100649
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All DBs
Position
3:22650133..22655055
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AA seq
460 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALSAPRSEELARSSSGSAFSPYPGSAAFTTPGTG
FTSPLQYTTDPATGFPSYMGSPYDAHTTGMAGAISYHPYGSPGYPYQLNDPAYRKNTTRD
ATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRN
KSEDEDEDDGDGERKDEHSEKNQHNNETSAEDEGIGLHVDNLTDHSCSAESDGEKVNCRN
GDSMCESGSETKDKLCDDDDDVEDEERGRGLSPKPVTSSPLTGVEAPERNHEDNCRNTHK
TSLDKIISSSSQTQTIKPKLWSLAEIATSDPKQHQGQHSPSSVLSSSTLSSTSSASTVYP
ASSILGRPIYYTTPFYSNYTNYSNFSPLQSQGILRYNSAATTANEGLSQNVLNTTTVHKQ
SSDSLIKSNSNQLEQHFRLASLESRKDSSVVCTVGAQPYQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacctttaccagccccctggctctttggctctctattcttgc
ccagcttacggtgcgtctgcgttatccgccccaagaagcgaggagctggcgaggtcttcg
tccggttcagcttttagtccttacccgggatcggcagccttcactactccgggtacgggc
ttcaccagcccgctgcagtacaccacggatccggccactggattcccgtcatacatgggt
tcaccttacgatgcccacacaacagggatggcaggagcgattagctaccatccatatgga
agcccggggtatccataccagctaaacgacccagcttaccgaaagaatacgacgagagat
gcgacagctaccctcaaagcttggctccaggagcataggaaaaacccgtaccccaccaaa
ggagaaaagatcatgctggccatcatcaccaagatgaccctgacccaggtctccacctgg
tttgccaatgccaggaggagacttaaaaaggagaataaaatgacctgggctccaaggaat
aagagtgaagacgaggatgaagatgatggggacggggaaagaaaagacgaacattcagaa
aagaatcagcacaacaatgaaacttcggctgaggacgaaggcattggtttgcacgttgac
aacctaacagaccactcttgctctgcggagtctgacggggagaaagtcaactgcaggaac
ggggacagcatgtgcgagtctggttcagaaaccaaggacaaactatgtgatgatgacgat
gatgttgaggacgaagaacggggtcgaggcctgtctcctaagcctgtgacatcctcgcct
ctgaccggggtggaagctcccgaacgtaatcacgaagacaactgcagaaacacacataaa
acgagcctggataaaataatttcttcaagctcacaaactcagaccataaagcctaagctt
tggtcgttggcagaaatagccacttcagatccaaaacagcaccaggggcaacattctcct
tcctcggtattatcatcatcaactctgtcatcgacgtcttcagctagcactgtttaccct
gcctcttcaatcctaggaaggcctatttattatacgactccgttttacagtaattacaca
aactatagcaacttcagccctctgcagagccaggggatcttgaggtataattctgctgct
acgacagctaatgaggggctcagtcagaatgtactaaatacgaccactgttcacaaacag
agcagcgactctctaataaaaagtaactcaaaccaactagagcaacacttcaggctcgct
agcttggaatccagaaaagactccagtgtggtgtgcacagtaggagcccaaccataccaa
tag
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