Polyodon spathula (Mississippi paddlefish): 121312883
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Entry
121312883 CDS
T07273
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2-like
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121312883
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121312883
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121312883
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1D. Rev-Erb
121312883
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121312883
NCBI-ProteinID:
XP_041100696
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Position
3:24371241..24379915
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AA seq
598 aa
AA seq
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MESTKAGGVIAYISSSVSSLSPESCHSDSSSSGYQSSSPSLPSSPSRRGHPVAEIHVSGG
VQSHSTPHCITKTSRSSAKGGITKIHGMVLFCKVCGDVASGFHYGVHACEGCKGFFRRSI
QQNIQYKKCLKNENCPVMRINRNRCQQCRFKKCLLVGMSRDAVRFGRIPKREKQRMLLEM
QSAMNNMMNNTHLNEKQLPAESSPERPGDSATSSSSSSSSSSSSFLNSPLQEWQQEPVSL
QSELEEMETVQTPSPSSSDSSEEVIETVTRAHKETFQYNQEQPSPMDKNVASQQGGGRMS
VGSEEGHGWYNRNSHNDFSSYNAYHHLGHGNQHMPREHHRDDTLAHCPSRHANGLTHGHC
PGFSNGCLYDTLSASKTPENDPMPKKSFSGPVWTGGNRMHLVCPMGMSPYVDSSKSGHDI
WEEFSMSFTSAVREVVEFAKRVPGFRDLSQHDQVSLLKAGTFEVLMVRFASLFDAKDRTV
TFLSGNKYSVDALRSMGAGDLLNSMFEFSEKLIALQLSEEEMSLFTAVVLVSAGRSGLEN
VNSVEALQETLIRALRTLIMKNHPNEASTFTKLLLKLPDLRSLNNMHSEELLAFKVHP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaactaaagctgggggtgtaatagcatacatcagctcctcggtctcgtcttta
agcccggagtcctgccacagcgacagctccagcagtggataccagtcttcctcaccgtcc
cttccttcatctcccagcaggagggggcacccagtcgcagagattcatgtgtctgggggg
gtccagagccacagcacccctcactgtataactaaaaccagtcgttcatctgccaagggt
ggaattacaaagattcatggcatggttctgttctgtaaagtgtgtggagatgtggcatct
ggatttcactatggggttcatgcatgtgaaggatgcaagggtttctttagaagaagcatt
caacaaaatatccagtacaagaagtgccttaagaatgaaaactgtcccgtcatgcgaata
aacagaaaccgttgtcagcagtgtcgcttcaagaaatgcttattagttggaatgtcaaga
gacgctgttcggtttggacgtatcccaaagcgtgaaaaacagcgcatgttgttagagatg
cagagtgccatgaacaacatgatgaacaacacccaccttaacgagaagcagctgcctgcg
gagtcatctccagagcgacctggagactctgccacttcctcctcttcctcctcctcctcc
tcctcctcctctttcttgaactcacccctccaggagtggcagcaggaaccggtgtcactg
cagtctgaacttgaggagatggaaacagtccagacaccttccccatccagctccgacagt
agtgaagaggtcatcgaaactgtcactagggcccacaaggagaccttccaatacaaccaa
gagcagcccagccctatggacaaaaatgttgcaagccagcagggcggaggcaggatgagt
gtcggctctgaggaggggcatggctggtacaataggaacagccacaatgatttcagcagc
tataacgcctaccaccacttgggccacgggaaccagcacatgcccagagagcatcacaga
gatgacactctggcgcactgtcccagcaggcatgccaatggactgacacacggacactgc
cctggcttttcaaatggctgtttgtatgataccctgagtgccagcaaaacacctgagaac
gatccgatgcccaaaaagagttttagtgggcctgtgtggacaggaggaaacaggatgcat
ttggtgtgtcctatgggaatgtccccttatgttgactccagtaaatcaggacatgatatt
tgggaggagttttctatgagcttcacctctgcagtacgagaggtggtggagttcgcaaag
cgtgtccccgggttccgagacctctctcagcacgaccaggtcagcctgctgaaggctggc
acatttgaggttttaatggtgcgctttgcatccttgtttgatgctaaggaccgtactgtc
actttcctgagtggaaacaaatacagtgtggatgcactgcgttccatgggagcaggagac
ttgctgaactcaatgtttgagttcagcgagaagctgattgctctgcagctcagtgaagag
gagatgagtctgttcacagcggttgtcctggtttctgctggccgttcaggtctggagaat
gtgaactcagttgaggcactgcaggaaactctaatcagagccctcagaaccttaataatg
aaaaaccaccccaatgaagcctccacttttaccaaattgcttttgaagcttccagacctc
cgctccctcaacaacatgcactcagaggagctgttggcctttaaagttcatccatag
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