Polyodon spathula (Mississippi paddlefish): 121312885
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Entry
121312885 CDS
T07273
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121312885
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121312885
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121312885
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
121312885
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121312885
NCBI-ProteinID:
XP_041100699
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Position
3:24594059..24710489
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AA seq
457 aa
AA seq
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MEMTARSQSCPIPVDGQMNRYPAGSYPFLYPSVISRLPFPPLHRLQGYPPACGCSTPSPA
TIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKN
MIYTCHRDKNCVINKVTRNRCQYCRLQRCFEAGMSKESVRNDRNKKKKETAKPECMESCE
LTAELENLIEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKI
VEFAKKVPGFTGLTIADQITLLKAACLDILILRICTRYTPDKDTMTFSDGLTLNRTQMHN
AGFGPLTDLVFTFANQLLPLEMDDTETGLLSATCLISGDRQDLEEPAKVDKLQEPLLEAL
KVYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKLEIPGSMPPLIQEMLENSEG
QDAQGAEKESTNKTEQSPNSSPRSEDSSPNSQPAAVQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagatgacagccagaagtcagtcctgccccattcccgtggatggccaaatgaacaga
taccctgcaggctcttatcctttcctatacccttcagtgattagcagactcccttttcct
cctctccacaggctgcagggctaccctccagcctgtggatgcagcaccccatctcctgcc
actattgaaacacagagcaccagttctgaagaactggtgccaagccccccatccccactg
cctccacccagagtttacaagccttgtttcgtctgtcaagacaagtcatccggctaccac
tatggagtcagcgcatgtgagggatgtaagggttttttccgcagaagtattcagaaaaac
atgatttatacgtgtcacagagataaaaactgtgttattaataaggtcacaagaaatcga
tgccagtactgccggctgcagaggtgcttcgaagcgggcatgtccaaagaatctgttcga
aatgacaggaataaaaagaagaaagagacggcaaagccagagtgcatggagagctgtgaa
ctgacagctgagttagagaacctcattgagaagattcgtaaagctcatcaggaaacattc
ccttccctctgccagctgggtaaatacaccacaaattccagtgctgatcaccgtgtacga
ctggacctcggattatgggacaaattcagtgaactggccacaaagtgcattattaaaata
gtggagtttgcaaaaaaggtacctggcttcacaggactgaccatcgcagaccaaataact
ctgctcaaagctgcctgtctagatattctgattctgagaatctgcacgagatacacccct
gacaaggacacaatgaccttctctgacggccttacgctgaaccgaacgcagatgcacaac
gcaggattcggccctctcacagacctcgttttcacgtttgccaatcaactcctgccctta
gagatggacgacacggagacaggactgctcagtgccacctgtctcatttctggagaccga
caagatcttgaggaaccagcaaaagtagataagctgcaggaaccacttctggaagcatta
aaggtttatataagaaagcggagacctagtaaaccacacatgtttccaaagattttaatg
aaaattacagatctgcgcagcatcagtgcaaaaggggcagaacgtgttataacactaaaa
ttggaaattccaggatcaatgcctccactaatccaggagatgcttgaaaactcagaagga
caagatgcacaaggagctgaaaaggaaagtacaaacaaaaccgaacagagccccaactca
tctccaagatcagaggacagcagccccaacagtcagcctgcagcagtacaatag
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