Polyodon spathula (Mississippi paddlefish): 121312896
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Entry
121312896 CDS
T07273
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1-like
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121312896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121312896
03032 DNA replication proteins [BR:
pspa03032
]
121312896
Spliceosome [BR:
pspa03041
]
Complex A
U1 snRNP components
Sm proteins
121312896
U2 snRNP components
121312896
Complex B
U1 snRNP components
121312896
U4/U6.U5 tri-snRNP components
121312896
Complex C
U2 snRNP components
121312896
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121312896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Hfq
Gemin7
YomU_Tube
AAA_RNF213_3
FlaEY_3rd
Phage_Hfq
Motif
Other DBs
NCBI-GeneID:
121312896
NCBI-ProteinID:
XP_041100725
LinkDB
All DBs
Position
3:complement(25185549..25190314)
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVCMNTHLKAVKMTLKNREPVQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtacgatttttgatgaagttgagccatgaaactgtaaccatagagttgaag
aacggaacacaggtgcatggcacaatcacaggtgtagatgtatgtatgaacacacatctc
aaagccgtcaaaatgacgttaaagaaccgtgagcctgtccagctggagtcgctgagcatt
cgtggaaacaacattcgctacttcattctgccagacagcttgccactggacaccctgctg
gtggacatcgaacccaaagtcaagtcaaaaaagagagaagcagttgcagggcgtgggcga
ggcagaggcaggggccgaggccgggggagaggcagagggagaggagggcccaggagataa
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