Polyodon spathula (Mississippi paddlefish): 121312949
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Entry
121312949 CDS
T07273
Name
(RefSeq) myocyte-specific enhancer factor 2C-like isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121312949
04371 Apelin signaling pathway
121312949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121312949
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
121312949
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
121312949
NCBI-ProteinID:
XP_041100873
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Position
1:complement(5195391..5272677)
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AA seq
502 aa
AA seq
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MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVEIKYIVGFSEVNVITTVQSEASAPLKASLFMSMHF
SMFMIIFSYTLNKKENKGCESPGHDSSYIFTPRTEEKYKRINEEFDNMIKNQKIPAVQPN
YEMPVSIPVSNPNNLIYNHPGSSLGNHNLLPLAHPSLQRNSMSPGVTHRPPSAGGMLGAD
LSTGAGISAGNGYGNHRNSPGLLVSPGSMNKNMQAKSPPPMNLGMNSRKPDLRVLIPPGS
KNTMPSINQRINNSQSAQSLATPVVSVATPTLSGQGMGGYPSSISTTYGTEYSLSSADLA
SLSGFNSASGLHLGSVTGWQQQQLHNMQHSALSQLGTCTSSHLSQNLSLPSTQSLHIKSE
PVSPPRDRTTSTPSGYPLHHSRHDSGRSPVDSLSSCSSSYEGSDREDHRNDFHSPLGLIR
ASQDERESPSVKRVRLSEGWAT
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagattcagatcacgcggattatggatgagcgtaatagacaggtgacg
tttacaaagagaaagtttgggttaatgaagaaggcctatgagcttagtgtactgtgtgac
tgtgagattgctctcatcatcttcaacagcaccaacaaactgttccagtatgccagcacg
gatatggacaaagttctgttgaaatacacagagtacaatgagccacacgagagtcgaaca
aactctgacattgttgagatcaaatatatagttggcttctctgaagtaaatgtaattact
actgtacaatctgaagcaagcgctcccctaaaagcatctctcttcatgagcatgcacttt
tcaatgttcatgataatattctcttatacattgaacaagaaggaaaacaaagggtgtgaa
agccccggtcacgactcctcttacattttcaccccacgcacagaagaaaaatacaaacgg
attaatgaagagtttgataatatgatcaagaatcaaaaaatacctgcggttcaacctaac
tatgagatgccagtatctatcccagtgagcaaccctaacaacctgatatacaaccaccca
ggcagctcactgggcaaccacaacctgttgccactggctcacccgtccctgcagaggaac
agcatgtctccaggtgtgacacatcggccacctagtgcaggtggcatgttgggtgcggac
ctctcgaccggtgcaggcatcagtgctggaaacggatatggaaatcaccgtaattcacca
ggtttgctggtctcacctggaagcatgaacaagaacatgcaagcaaagtcaccaccaccc
atgaacctggggatgaacagtcgcaagcctgacctgcgtgtgctcatcccgccaggctcc
aagaacaccatgccatccattaatcagagaataaacaactctcagtctgcacagtcatta
gcaactcctgtggtttctgtagcaacccctactctgtcaggacaaggaatgggtggatac
ccatcatccatttctaccacatatggtactgaatactccttgagcagtgcagacctggcc
tccctctccgggttcaatagtgccagtggccttcacctgggctcagtcactggctggcag
cagcagcaactgcacaacatgcagcactcagccctcagccagttaggaacttgcactagc
tctcacttatctcagaatctctccctgccttctactcaaagcctccacatcaagtcagaa
cctgtttctcctcctagagaccgcaccaccagcacgccgtcggggtaccccctgcaccac
tctcgccacgactccgggaggtctccggttgacagtctgagcagctgcagcagctcctac
gagggcagcgaccgggaggaccaccggaacgacttccactccccgctcggactcatcagg
gcctcgcaggacgagagggagagcccgtcagtgaagcgcgtcaggctgtcggagggatgg
gccacatga
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