Polyodon spathula (Mississippi paddlefish): 121312992
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Entry
121312992 CDS
T07273
Symbol
tonsl
Name
(RefSeq) tonsoku-like protein isoform X1
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121312992 (tonsl)
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121312992 (tonsl)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
121312992 (tonsl)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121312992 (tonsl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
Ank_4
Ank
Ank_2
Ank_5
TPR_8
TPR_2
Ank_3
TPR_1
TPR_7
LRR_6
LRR_4
TPR_10
TPR_MalT
RPN7
TPR_16
ANAPC3
Par3_HAL_N_term
Motif
Other DBs
NCBI-GeneID:
121312992
NCBI-ProteinID:
XP_041100996
LinkDB
All DBs
Position
3:complement(32857021..32889706)
Genome browser
AA seq
1451 aa
AA seq
DB search
MSGAREVKQLQKAKSKAQRNNNLREEASLCNQLGEILARSGNFQAAIEEHQQELQLSESL
RDVIGCAIANRKIGECFAELGNYEAALKHQRRHLELACSVNDDAEEQRAWATIGRTFLFR
YEADQSQDSLREAEGAFRKSLCIVDERLEGKVLSRELSEMRARLYLNLGFVYDGLKDSQR
CSDFIRRSVFIAEQNQLLEDLYRANFNLGSIHFRNGQHTRAVRCLEHAKECARKMKEKFL
ESECYHSIGQVLLNLGDFVAAKRALKKAYTMGSQQPSERGAVRRNLMYAIKGCRLEEALA
EQSESDAQGIVGITEQLGDLYCKVGCYRKALDSYQAQLSGAQSMGKPARELTAIHVSLAA
TYTDLKQHKKAVEHYRKELALREGSPVEECETWLNIALSLEEDGCVLEELEGCYQSALEC
AQRAGLPKLQHRVLKQLLIVQQKLGSPDTDSTVSRLKDLCGSPGWSDGESEGEEEHEEEE
NSEELEDSDLELSESEEEEEDLDGYQKAVPGRRKVKQWNRRNEKGETVLHRACIEGNLKQ
VQCVVDKGHPLNPRDYCGWTPLHEACNHGHLDIVGFLLDRGANVNDTGGPHCDGITPLHD
ALTCGNFQVAQLLIERGASGTLRNAKGETPHDSLREWLRMYGKHLDQETRQECRETESLL
KRAASGRVPAPRPPQQMVSDFQDSQLFDAENSEPLVLPNSRVATPWRGSDSPSSSFSVEA
VPYSSSRGRSSSTQQPQHRDSESMALELGEQAEGQLGSCSSSESTTEPDNPIISPLRPIR
GKRRLLSPTSPVTLQPENPTYPHAADDLDWASEDEADEDPPIRSVDLLESPVSMREEYQR
AIQSLGSAKSRLLMSNSLSEPGSTLANMLSASSKSALVPEEEYVADDWLEDDIGEGQSKK
RRRISSGQEARREAVIPANSTRQQPASVALPAPTTRGSASRGLSMKKGRSRQVKMTQLSG
MVVLGSRRSGSPLPFTQEEQSSSLTQTPVQHHLQAVAPALPAPIRVRVRVQDNIFLIPIP
HSEAETCTVSWLAEQAAQRYYQACGLHPHLSLQKEGALLAPQDMIVHVLHSNEEVLAEVR
SWDLPPLLDRYRKACQSLSVDENRTLSRLCELQDGSPCLSASHLSLQPRCIAPLLRCLKL
QACLKELRLPGNRLHDNLMGELIATATTMPNLRILDLSANHITGEGLKQACVALEGQSQT
VFPSLEELDLSLNLLGDSISQSLASLVLACPLLATLRLQGCGLSACFLQQHRPLLASALT
GTGHLKTVCLSHNALGSMGVELVLRTMPPNSLTCLELSAIRLGPADHPIMDHLIAYLSRE
GCCLTHLSLAGNGLTDSDVCTLARCLPVCPSLVSLDLSGNPGVTTAGLETLLCVLKEGQC
TLQSLNLAGCLVSGPWDRVSLDSLSSCLQELRLCSRRLNKLDKEALVWDRRPGLISVMSR
HNKCFIRTADS
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgccagggaagtcaaacagctgcagaaagcaaagagcaaagctcagcgtaac
aacaaccttcgagaggaagccagtctgtgcaaccagctgggagagatcctcgccaggagc
ggtaatttccaggctgcgatcgaggagcatcagcaggagttgcagctctccgagtccttg
cgtgatgtgattggctgcgcaatcgcgaacaggaagatcggcgagtgctttgctgagctg
ggcaactacgaggcagcactcaagcaccagcggcggcacctggagttagcatgctcagtg
aacgatgatgcagaggagcagcgagcctgggctaccattggcaggactttcctgttccgc
tatgaggccgaccaatcacaggacagcttgagggaagctgagggagccttcaggaagagc
ctgtgcattgtggacgaaaggctagagggtaaagtgctgtcccgggagctcagtgagatg
cgcgctcgtctctacctgaacctgggctttgtttatgatggactgaaggacagccagcga
tgtagtgacttcatccggaggagtgtcttcattgcagaacagaaccagctgctggaggac
ctgtatcgtgccaactttaacctgggcagcatccacttccgcaacgggcagcacaccaga
gctgtgcgctgtctggagcatgccaaggagtgtgctcgcaaaatgaaggagaaattctta
gagagcgaatgttaccacagcattggacaggtgttactgaaccttggtgattttgtggct
gccaagcgtgctctgaagaaagcctacaccatgggttcccagcagccttctgagagaggg
gcagtccggaggaacctcatgtacgcgattaaaggctgccgtctggaggaagccctagca
gagcagtcggagagtgatgcccaggggattgtgggaataacagagcagctaggagacctc
tactgtaaagtgggctgttacaggaaagcactggactcgtaccaagcacagctgtctggt
gctcagtccatggggaagcctgcgcgagagttaaccgcgattcatgtctcgctggcagcc
acctacactgacctcaaacagcacaagaaagctgtggagcattacagaaaggaactggcg
ctcagagaggggagccctgtagaggagtgcgagacgtggctgaacatcgctttgtctctg
gaagaagatgggtgtgtgttagaggagctcgagggttgctaccagagtgctctagagtgt
gcacagcgagcagggctaccgaaactgcagcatcgggtgttgaagcagcttctgatagta
cagcagaagctgggctctcctgacacagacagcacagtctccagattgaaggacctctgt
gggtcgccgggctggagtgatggagagagcgaaggagaggaggagcatgaggaagaagag
aacagcgaggaattggaggacagtgacctggagctgtcggaatctgaggaggaggaggag
gatcttgatgggtaccagaaggcggttcctggcaggaggaaggttaagcagtggaatcgt
cgaaatgagaaaggcgagacagttctacaccgtgcttgtattgagggcaacttgaagcaa
gtccagtgcgtagtggataagggtcacccgctgaatccccgggattattgtggctggacc
cccctccacgaggcctgcaatcacgggcacctcgatattgtagggttcctgctggaccgc
ggtgcgaatgtcaatgacaccgggggccctcactgcgatgggatcacaccacttcatgac
gccctcacctgtgggaacttccaggtagcgcagctgctgattgagagaggggcctctggg
acattgaggaatgccaagggtgagacccctcatgacagcctgagagagtggctgcggatg
tatggcaaacacctggaccaggaaaccaggcaagagtgcagagaaactgagagcctgctg
aagagagctgcttcagggagagtgccagcccctcgacccccacagcagatggtcagtgac
ttccaggacagccagctgtttgatgcagagaactcggagcccttggtcctgcccaactct
cgggtcgccaccccctggaggggcagcgacagccccagcagctctttcagtgtggaagca
gtaccatacagtagcagcagagggcgctccagcagcactcagcagccacagcacagagac
tctgagagtatggcactggagctgggggaacaggcagagggtcagctggggagctgtagc
tcttcagagagcacgactgaaccagacaaccctatcataagccctctgcgaccaatcagg
ggcaagcgcaggctgttaagccccacctccccagttactctccagcctgaaaaccccaca
tacccacatgcagcagatgatttggactgggccagtgaggatgaggcagatgaagatcct
ccaatcaggagtgtggatttactggagtcccctgtatccatgagagaggaataccaaaga
gcaatacaaagcctgggcagtgccaagtcacgactcctcatgtcaaacagcttatcagag
cctggctccacccttgcaaacatgttgtcagccagtagtaagtcagcactggtgccagag
gaggagtatgtggcagatgattggctggaggatgatattggtgagggtcagtccaagaag
aggaggagaatttcttctgggcaggaagccagacgagaggctgtgattccagcgaattcc
actaggcagcaacctgcctctgttgctttaccagcaccaaccaccagaggctcggctagc
cgggggctatcaatgaagaagggacgctctcggcaggtgaagatgacacagctgtcgggg
atggtggtcctgggcagccgtcgatctggcagccctctgcctttcacacaggaggagcag
agcagctccttgacacagactccagttcagcaccatctccaggctgtggctccagctctc
cctgcaccaatcagagtgcgggtcagagttcaggacaacatcttcctcattcctattccg
cacagtgaggctgagacgtgcacagtgtcctggctggctgagcaggcagctcagcgctat
taccaggcctgtggtttgcaccctcacctctccctgcagaaagagggcgctcttctggct
ccacaggacatgattgtgcatgtgctgcacagcaatgaggaggttctggctgaagttcgc
tcatgggatctgccccctctattggatcggtaccggaaagcctgtcagagtctctctgta
gatgagaaccgcacgctcagcaggctgtgtgagctccaggatggcagcccctgcctctct
gcctctcatcttagtctccagcctcgctgcattgctcctttgctgcgctgcctcaagctg
caggcctgcctcaaggagctccggctgcctggaaaccgtctccacgacaacctcatgggt
gagctcatcgccacggcaaccaccatgccgaatcttcgcattctggacctctcggccaat
cacatcacaggggaggggctaaagcaagcctgtgttgcactggaggggcagagccaaaca
gtcttcccgagtctggaggagctggatcttagcctgaatctcctgggggacagtatctcc
cagtccctggcttccctggtgttagcctgccccctgctggccactctgaggctgcagggc
tgcggactaagtgcctgtttcctgcagcagcatcgcccactgctggccagtgcactcaca
gggactggtcacctgaagactgtctgtctctcccacaatgctctgggctcgatgggggtg
gagctggttttgaggaccatgcctcctaactccctgacttgtctcgaattgtctgccatt
cgcctgggaccagcggaccatccaatcatggatcacctgatcgcttacctgtctcgggag
ggctgttgcctgactcacctaagcctggctgggaatggattgactgactctgatgtctgc
acacttgccaggtgtcttccggtgtgtccctcactagtgtctcttgacctatctggaaat
cctggagttactactgcaggactggagacactgttgtgtgtccttaaagaggggcagtgc
acactgcaatcactgaacctagcaggctgcctggtttcgggtccctgggacagagtttct
ctggacagtctgtcctcttgtctgcaggagctgcgtctctgttcacggaggctcaacaag
ctggacaaggaggctctggtgtgggacaggagaccgggtctgatcagtgtaatgtcacgg
cacaacaagtgtttcattaggacagcagattcctga
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integrated database retrieval system
