Polyodon spathula (Mississippi paddlefish): 121312994
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Entry
121312994 CDS
T07273
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03030
DNA replication
pspa03410
Base excision repair
pspa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121312994 (zgc:110269)
03410 Base excision repair
121312994 (zgc:110269)
03450 Non-homologous end-joining
121312994 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspa03032
]
121312994 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121312994 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121312994 (zgc:110269)
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
121312994 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
121312994 (zgc:110269)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
121312994 (zgc:110269)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121312994 (zgc:110269)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
XPG_I_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
121312994
NCBI-ProteinID:
XP_041101000
LinkDB
All DBs
Position
3:complement(32917371..32931875)
Genome browser
AA seq
349 aa
AA seq
DB search
MGIVKLAELIRNVAPDAISYKTIGDYSGKKIAVDASIVLFQFRTACPKICNRDGAHLSPL
VGLFYRTLHFLENDVRPVYVFDGLPPEQKEALLDRRAEAGGWARTQRPVSNQVQDCQKIL
KLLGVPYLQAPSEAEAQCAELVKCGEVDGVASEDMDVLPFGSTLLIRQLSTREHRSVVEY
SLPKVLKTLGLTHEQFVDLCILLGCDYCEKIGGLGPKRALALVQQHKTIEDVLLNINRTT
HPVPENWKYLDARKLFLDPEVANQTSRSLSWEEPDEEGLVNFLSHEKYIKEERIRRRMEK
FRRVREGRKQKGSDEGKQQQTLMDDFFRVTRSRQAPDAVDQTVSKKSKF
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggtattgtgaaactggcagaattaatacgcaatgttgcgccggatgcgatctcttac
aaaacaataggtgactattcaggtaagaagattgctgtggatgcctccattgttctattt
cagttccgcacggcctgccctaagatctgcaaccgcgatggagcacacctcagcccgctg
gttggtttgttctaccgcactctgcatttcctagagaatgatgtcaggccagtctatgtc
ttcgatggactcccgcctgagcagaaagaggcgctgctggacaggcgagctgaggctgga
ggctgggccagaacacaaaggccagtctccaatcaagtacaggactgccagaaaatactg
aaactgttaggagtaccatatctccaggcccccagtgaagctgaagcacagtgtgcagag
ttggtgaagtgtggtgaagtggatggagtggcttcagaggacatggatgttctgccgttt
gggagcacgctgctaatccgccagctcagtaccagagagcacaggagtgtagtagaatac
tccttgccaaaggtgctgaagacactgggactcacacatgagcagtttgtagatctgtgt
attttgcttggctgcgattattgtgagaagattggcggcctgggaccgaagcgagcactg
gcccttgttcagcaacataaaaccattgaggatgttcttctaaatatcaaccgaacgaca
cacccagtccctgagaactggaaataccttgatgctcgcaaactcttcttggatcctgag
gtagccaatcagactagccgatcgctaagctgggaggagccagacgaggaagggctggtg
aacttcctgtcacatgaaaaatacatcaaggaggagcgaataagacgcaggatggagaag
tttcgtagagtgcgtgagggcaggaagcagaaagggtctgatgaggggaaacagcaacaa
accctcatggacgatttcttcagagtgacacgaagcagacaggcaccagatgctgtggac
caaactgtcagcaagaaatcgaaattctag
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