Polyodon spathula (Mississippi paddlefish): 121313013
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Entry
121313013 CDS
T07273
Name
(RefSeq) catenin beta-1 isoform X1
KO
K02105
catenin beta 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04510
Focal adhesion
pspa04520
Adherens junction
pspa04916
Melanogenesis
pspa05100
Bacterial invasion of epithelial cells
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121313013
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121313013
04520 Adherens junction
121313013
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121313013
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121313013
05100 Bacterial invasion of epithelial cells
121313013
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT_EZ
HEAT_2
Adaptin_N
KAP
ARMC9_ARM
Atx10homo_assoc
Queuosine_synth
AglB_L1
Motif
Other DBs
NCBI-GeneID:
121313013
NCBI-ProteinID:
XP_041101034
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Position
3:33942324..33963414
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AA seq
781 aa
AA seq
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MATQSTDLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDN
QVLYEWEQGFTQSYTQDQVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDGAHPT
NVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSK
KEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPAL
VKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDC
LQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEA
GGMQALGLHLTDQSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCA
AGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEM
AQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL
VRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFV
QLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLF
RMSEDKPQDYKKRLSVELTSSLFRTEPMTWNETGDLGLDMGAQGEPLGYRHDDPSYRSFH
SGGYGQDAMGMDPMMDHDMGGHHPGAEYPVDGLPDLGHAQDLIDGLPPGDSNQLAWFDTD
L
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggctacccagagtactgatttgatggagcttgacatggccatggagccagaccgtaaa
gcagcagttagccactggcagcagcagtcctacttggattctggtatccactctggtgct
acaaccacagcaccttctctgagtgggaaaggcaacccagaagaggaggatgtggacaat
caagttctgtatgaatgggagcaaggcttcacacagtcttacacgcaggatcaagttgct
gatattgatggccagtatgccatgaccagagctcagagggtgcgagctgcaatgttccct
gaaactctggatgaaggaatgcagatcccttccacacaatttgatggcgcacatcctact
aatgtacagcgtttggctgaaccatcccagatgctgaagcatgctgtggtcaatcttatc
aattatcaggatgatgctgaactggcaacacgtgccatcccagagttgaccaaacttctg
aacgatgaggaccaggttgttgtgaacaaggctgcagttatggtccatcagctgtctaaa
aaagaagcctcccgccatgccatcatgcgctctccccagatggtatctgccattgtccgc
accatgcaaaatacaaatgatgttgagactgcacgctgcacagctggaactctccataac
ctctcgcatcatcgtgagggcctgcttgccatcttcaagtcgggaggtatccctgcttta
gtgaagatgctgggatcgcctgttgactcggtcctgttctatgccattacaactcttcat
aacctcctactgcaccaggagggagctaagatggctgtccgtcttgctggtggtctccag
aagatggttgccctactgaataaaaccaatgtcaaattcttggccatcacaacagattgc
cttcagatcttggcttatggcaaccaagaaagcaagctcatcattttggccagtggtggt
ccacaggcacttgttaacatcatgagaacctacacctatgaaaagctgctttggaccacc
agtcgtgtcttgaaggtcctttcagtctgttccagtaacaagcctgccattgttgaagct
ggtggcatgcaggccttgggactccacctcacagaccagagtcagcgcctggtgcagaac
tgtctgtggaccctgagaaatctttcagatgctgctaccaagcaggagggtatggaaggt
ctccttggaacacttgtccagctcctgggttctgatgacattaatgttgtgacttgtgca
gctggtatcctgtccaatcttacctgtaacaactacaaaaacaaaatgatggtgtgccaa
gtaggaggtatcgaggccttggttcgtactgttctccgtgctggtgaccgggaagacatc
actgagccagcaatctgtgctcttcgccacctaaccagcagacaccaggatgctgagatg
gctcaaaatgcagttcgtctccactatggcctgcctgtggtagtaaagttgctgcatcct
ccatctcactggcctctgattaaggcaacagtaggacttattcgcaacttggctttatgc
ccagcaaaccatgctcccctgcgtgagcagggtgcaattcccagactagtgcagctattg
gtgagagcacaccaggacacccagcgccgtacctctatgggcggaacacagcagcagttt
gtggaaggagttcgtatggaggaaattgttgaaggctgcacaggagctctgcacattctg
gcaagagatgttcataacagaattgtcatcagaggactaaacaccattccactctttgtt
cagttgctgtattctccaattgaaaatatccagagggtagctgcaggagtactctgtgaa
ctggctcaggataaggaagctgcagaggcaattgaggctgagggtgccactgctcctctc
actgagctgcttcactccaggaatgaaggtgttgccacctatgctgctgccgttttgttc
cgtatgtctgaggacaaaccacaagactacaagaaacgtctctctgttgaattgacaagc
tctttgttcagaactgaacctatgacttggaatgagactggagatcttggacttgatatg
ggagcccagggagaacctcttggataccgtcacgatgatcctagctaccgttccttccac
tctggtggatatgggcaggatgctatgggtatggacccaatgatggaccatgacatgggt
ggtcatcaccctggtgcagagtacccagttgatgggctgccagatcttggacatgcccag
gacctgattgatgggttgcccccgggtgatagcaatcagctggcctggtttgatactgat
ctctga
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