Polyodon spathula (Mississippi paddlefish): 121313068
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Entry
121313068 CDS
T07273
Name
(RefSeq) rab effector MyRIP-like isoform X1
KO
K22237
Rab effector MyRIP
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121313068
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121313068
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
DUF6074
zf-piccolo
DUF6468
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
121313068
NCBI-ProteinID:
XP_041101140
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All DBs
Position
3:complement(38224762..38412021)
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AA seq
850 aa
AA seq
DB search
MGRKLDLSSLTEDEAGHVLQVVQRDMCLRKKEEERLNEMKQELDEEGSKCTILARQNKFN
DHCCMRCCSPFAFLINTKRQCQDCKFNVCKSCSSYSKEDKAWICAVCQKSRLLRTQSLEW
YYNNVKSRFKHFGSSKVLKMFYRKHHTERGAHSDVGVDGSFHEGSVDYAESTCGSDSTFY
RQSEGHSMAETLTVALRVAEEAIEEAISKAEECRDSLEKQNEAQYLRDNKEELIEELATT
IVQKIIRRRKNSELQPDSEMEWPLSRNSGLTSPTISKHSTVNCPTSRKGSYSLLRSQSAF
SLTGDEPPVQPVDSSWKSTISKASCRSQKGYPSLKNDPRPSTIPSWKSMDRLDNSNPSSV
LQSPDGNWIALQSTFQRRPSLLTKPKSQVFTSLEKESGVISAYDELGSDTEDECDLNEFR
RRPRKLSDETYYTDSQYDPEWTYARHRPVTSPSSGQYTNTETMFSDSETSSMYSVRDSLP
HIGKQQVLKRKGPDHGEALDINFNPQACGLGTVDSSEAEEPSRPCVRRSRRRRKSKPSSR
EHTHNRERYHTQSTDAYQFYDDSLGAGAVDEGFLPQREADALEMKLKSKLSELTANVSDN
ESSSGEEREQEDVRLIQVPLGSSCCEERQNIQEDTRKKYSAVSLCNITTEVLKIINATEV
LLEEATGDSDSPSLQDKGRLGEETDTVKFQEHLTKLEENVYLTAGTVYGLEGQLDDLEEC
ARSINSITTENQLAYLEDQVASAAAQVHRAEIQVSDIELRISALKNAGLNVTPYMRLAKQ
KEDTPWQPQTIGTSRQQRRKLPAPPKQGDKISSAVIVTGNPLGQRTANERKNSAKDHTTQ
KPDVHSNFMY
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaagttggatctttcaagtctgactgaagatgaagctggccatgtacttcag
gtggtccaaagggacatgtgtcttcggaagaaagaggaggaacgcttgaatgaaatgaaa
caggagcttgatgaagaaggcagcaaatgcacaatcctcgccagacagaacaaatttaat
gaccactgctgcatgcgctgctgctctcctttcgcattcctcataaacactaagcgtcag
tgccaggactgcaaattcaatgtctgtaagagctgcagcagctacagcaaggaagacaag
gcatggatctgtgccgtttgccagaagagcaggcttctaagaacacagtctttggaatgg
tactacaataacgtcaaaagccgattcaaacactttggcagttcaaaggttttgaagatg
ttttacagaaagcatcatacagaaagaggagctcactcagatgtaggagtagatggaagc
tttcatgaaggaagtgttgactatgcagaaagcacctgtggcagcgactctacgttttac
agacaaagtgaagggcacagtatggcggaaaccctcacagtcgcacttcgagttgcagag
gaagcaatagaggaggcgatttctaaggctgaagagtgtagggatagtttggagaagcaa
aatgaggcccagtacttgcgtgataacaaagaagaactaatagaagaacttgccacgaca
attgtgcaaaaaattataaggaggaggaagaattcagagttgcagccagactctgagatg
gaatggcctctgtcccgtaacagtggtctgacatccccgacaatctccaagcacagtact
gtcaactgtccgacaagccgcaaaggatcctacagcttattgaggtctcagtctgctttc
tctctcactggtgacgaacctccagtacaaccagtggattccagttggaagtcgaccatt
tctaaagcatcatgcaggagccaaaagggatatcccagcctgaaaaacgatcccaggcca
tccacaattccaagctggaaaagcatggataggcttgataattctaatccatcttctgtt
ttacaaagtcctgatggaaactggatagccctgcaaagcacatttcagcgccgcccgagt
ttgctgaccaaacccaaaagccaggtgttcacatctcttgagaaggaatctggcgttatc
tctgcctatgatgaattgggctcagatactgaagatgaatgtgatttaaacgagttcaga
aggcggccacgaaagctctctgatgaaacctactacactgactcccagtatgatcctgaa
tggacctatgcaaggcatcggcctgtcacttccccatcctccgggcagtacaccaacaca
gagaccatgttctctgattcggaaacctcctctatgtattctgtgagagacagcctgcca
cacatcggcaagcagcaggtactgaagaggaaaggcccagaccatggtgaagcacttgat
atcaactttaacccacaggcatgtggtttgggtactgtggacagtagcgaggcagaggag
cccagcaggccttgtgtcaggaggtctcggcgcaggaggaaaagcaaaccttcgtctaga
gagcacacccacaacagagagcgctatcacacacaatctacagatgcctaccagttctat
gatgattcactgggagcaggtgctgttgatgaaggcttccttccacaaagagaagcagat
gccttggagatgaaactgaagtcaaaattatctgagctgactgctaatgtgagcgataat
gagtcttcttcaggagaagagagagagcaggaggacgtcagactgattcaggtaccactg
gggagctcctgttgtgaagagagacaaaacattcaggaggatactaggaagaagtattct
gctgtatctctctgcaacattacaacagaggtcctcaaaataatcaatgctacagaggtg
ttgcttgaggaagctacaggggacagtgactctccatcactgcaggacaaggggagactc
ggtgaggaaacagacactgtaaaatttcaagaacacctcaccaaactggaggagaatgtc
tatctgactgctggcactgtttatggccttgaaggacaactggatgacttagaagaatgt
gcacgcagcattaacagcataactactgagaatcaactagcttatttggaggatcaagta
gcgtcagcagcagcacaagttcaccgagcagagatccaggtatcagatattgagctacgg
atttcagcccttaaaaatgcaggtttgaatgtaaccccatatatgcgattggcaaaacaa
aaggaagatacaccatggcagccacaaaccataggtacttcacggcaacagagaagaaaa
cttccagccccaccgaagcaaggagacaagattagttctgctgtaatagtaactggaaat
cctttgggacaaagaaccgcgaatgaaaggaaaaacagtgccaaagaccacacaacacag
aagccagatgtgcactccaattttatgtactaa
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