Polyodon spathula (Mississippi paddlefish): 121313153
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Entry
121313153 CDS
T07273
Name
(RefSeq) tubulin beta-5 chain isoform X1
KO
K07375
tubulin beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
pspa04540
Gap junction
pspa04814
Motor proteins
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121313153
09144 Cellular community - eukaryotes
04540 Gap junction
121313153
09142 Cell motility
04814 Motor proteins
121313153
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121313153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121313153
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121313153
04147 Exosome [BR:
pspa04147
]
121313153
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121313153
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121313153
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121313153
Exosomal proteins of colorectal cancer cells
121313153
Exosomal proteins of bladder cancer cells
121313153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
121313153
NCBI-ProteinID:
XP_041101310
LinkDB
All DBs
Position
3:complement(50586956..50593737)
Genome browser
AA seq
445 aa
AA seq
DB search
MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGNYVGDSTLQLERINVYYNEASSQKYV
PRAVLIDLEPGTMDSVRSGPFGQLFRPDNLIFGQTGAGNNWAKGHYTEGAELVDSVLDVV
RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSSTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKVAVCDIPPQG
LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
EYQQYQEATADGEETFEEEEEEVNE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatagttcacatacaagcaggccaatgtggtaaccaaattggaaccaagttt
tgggaagtgatcagtgatgaacatggcatcgacccagcaggaaactatgtcggcgactca
actctgcagctggagaggataaacgtttactataacgaggcatcctcccagaagtacgtt
ccacgagcagttctgattgatctggagcctggcacgatggatagtgttcgatcagggcct
tttggtcaacttttcagacctgataacttaatttttggacaaacaggtgcagggaacaac
tgggcaaaaggccattataccgaaggggccgagctggtggactctgtgctggatgtggtg
aggaaagaatgcgagcactgtgactgtctgcaggggtttcagctcactcactccctagga
ggaggcacaggctctggaatgggaacactactcatcagcaaaatccgagaggagtatccc
gacaggattatgaataccttcagcgtcatgccttctccaaaagtgtcagacactgtagtt
gaaccttacaatgccaccttgtccgtccatcagctggttgagaatactgatgaaacatac
tgcatcgacaacgaggccctttacgacatatgctttcgcacactcaagctcaccactccc
acgtatggggacctgaaccacttggtgtcatcgacaatgagtggggtcaccacctccctg
agattcccaggacagctcaacgctgatctacggaagctagctgtcaacatggtgccattc
cctcgcctgcatttcttcatgcctggtttcgcaccgctcacagcccgtggcagccagcag
taccgtgctctcacagtccccgagctgacacagcaaatgtttgacgccaagaacatgatg
gctgcctgcgacccaaggcacgggcgctacctaacagtggccaccgtcttccggggtccc
atgtcgatgaaggaggtggacgagcagatgctggctgtccagaacaagaacagtagttac
tttgtggagtggattccaaataatgtcaaggtggcagtgtgcgacattcctccccaaggc
ctcaagatggcttccacgttcataggcaacagcaccgctattcaggagctgttcaagcga
atctcagagcagttttctgccatgttcaggagaaaggctttcctccactggttcactggg
gaagggatggatgagatggagtttacagaggcagaaagcaacatgaacgaccttgtctct
gagtaccagcagtaccaggaggccacagctgatggagaggagacattcgaggaggaagag
gaagaagtgaatgaataa
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