Polyodon spathula (Mississippi paddlefish): 121313204
Help
Entry
121313204 CDS
T07273
Name
(RefSeq) RNA-binding protein 12B-like
KO
K24526
RNA-binding protein 12
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121313204
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121313204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
121313204
NCBI-ProteinID:
XP_041101450
LinkDB
All DBs
Position
3:complement(55998910..56010420)
Genome browser
AA seq
672 aa
AA seq
DB search
MAVVIRLQGLQITAGSEDIRSFFTGLTIPDGGVHIIGGELEEAFIIFATDEDARRAMTRS
GGCIKGSPVRLLLSSKSDMQNTLEASRRKPGCANGEITDERPGFKRPKTRNLPTTFAKDL
VAEIRRMKPSKLTSGLQGSGYVNIDPDDSLLASKLSCDGYYLYLRGMPFSATEDDVTMFF
KGLEVEEIILLKNRRGQPSGNGLVKFATQQDALGGLERDRAYIGTRFVEVNATTEKEWIA
AGGYIRPSEEVLYDHPREMSPVYVKRYSKERLRSRSPIREQPDCFAPSVEEHYVLLENLS
HSNDKRDIKKFFQHAVLDDDQILWFHDKYGGKTREAFVLFKKLRDYCNALDRKKGKLGDR
TIYVSPISKKKMVEMISAEKQKLDMYDERSVQLQEKNQQIKKQHSSSEDYPSPRTCIYVR
NLPFDVQKEELRIFFAGFWLAEDCIHLLYDEKGVGLGEALVKFKSENWAINAERLNRRQF
LGHEVLLRRITREQMQEFGVADDLVKEDQRENSPPKYIGSNEESFFQHGGEVSAPALSVP
SDTIPPPMQDFTFGPNTGNSGLYQAVDNTGGFWDGGQGTNLNANGSSGFGECGGPTCVKL
MNLPFQINLNEIYDFCYGYRVIPGSISLQFNKKGFPKGTATVVFETNEEAQSAVKELNSR
PIGTRKIRLDFL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgtttacagggccttcaaatcactgcagggtctgaggatatacgc
agtttcttcaccggactgacaatacccgatggtggggtacatataattggtggggagctt
gaagaagctttcattatttttgccactgatgaagatgcaaggcgtgctatgacacgatca
ggaggatgcattaaaggctctccagtacgtctattgctcagcagcaagtctgacatgcaa
aatactcttgaggcaagccgaagaaaacctggatgtgctaatggggagattacagacgaa
agaccaggtttcaaaaggcctaaaacaaggaacctgcctacgacctttgcaaaggatctc
gttgcagaaattagaagaatgaaaccttcaaaattgacttctggcttgcagggttctgga
tatgtgaatattgaccctgatgatagtcttttagccagtaagttgagttgtgatggctat
tatttgtatttgcgtggcatgccattttctgccacagaagatgatgttactatgtttttc
aaaggattggaagtagaggaaatcatcttgctgaaaaacagacgaggtcaacctagcgga
aatggcctggttaagtttgcaactcagcaggatgcacttgggggacttgaacgcgaccgt
gcatatatcggaactagatttgttgaagtgaatgccactacagaaaaggaatggattgct
gcaggaggttacataaggccaagtgaagaggttctctacgatcaccccagagagatgtca
ccagtgtacgtgaaacgctattctaaggaacgtttaaggtcaaggtcaccaataagagaa
cagcccgattgttttgcacctagtgtggaggagcattacgtcctgctggaaaacctatct
cattctaatgacaagagggatataaaaaagttcttccaacatgcagtcttggatgatgat
cagattttgtggtttcatgacaagtatggaggcaagaccagagaggcttttgttttattt
aagaagttaagagactattgcaatgcattagaccgcaaaaagggtaagcttggggaccgc
acaatatatgtatctcccatttcaaagaagaaaatggtggaaatgatttctgctgagaag
cagaagctagacatgtacgatgaaagatctgttcaattgcaggaaaaaaaccagcagata
aaaaagcagcattcatcaagtgaagactatccatccccaagaacatgcatctatgtacga
aaccttccatttgatgtccaaaaggaggagttgaggattttctttgctggattttggcta
gctgaggattgcattcacttgctttatgatgaaaaaggtgttgggcttggggaggctttg
gtgaagttcaaatctgagaattgggcaataaacgcagagcgtttgaataggagacagttt
ctagggcacgaggtgttgctgaggcgtattacaagggaacaaatgcaagaatttggtgtt
gcggacgatttggtaaaggaagatcagagagagaatagtcctccaaagtacattggaagt
aatgaggagtcctttttccaacatggaggagaagtttcagcacctgcattaagtgttccc
tcggacacaattccacctcccatgcaggacttcacatttggccctaacactggtaacagt
ggattgtatcaagctgtggataatactggtggtttttgggatggagggcaaggaactaat
cttaatgcaaatggatcaagtggctttggagagtgcggtggtcccacttgtgtcaaactg
atgaacttgcctttccaaataaatctgaacgaaatctatgacttctgttatggctaccgt
gtaattccaggctctatatcattgcagttcaacaagaagggttttccaaaaggtactgca
acagttgtctttgagacaaatgaggaagcacaatctgctgtgaaggaattgaatagcaga
ccaattggtactcgaaaaatccgtttggatttcctttag
DBGET
integrated database retrieval system
