Polyodon spathula (Mississippi paddlefish): 121313255
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Entry
121313255 CDS
T07273
Name
(RefSeq) frizzled-6-like isoform X1
KO
K02376
frizzled 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04150
mTOR signaling pathway
pspa04310
Wnt signaling pathway
pspa04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121313255
04150 mTOR signaling pathway
121313255
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121313255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121313255
G protein-coupled receptors [BR:
pspa04030
]
Frizzled / Smoothened family
121313255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
DExH18_N
Motif
Other DBs
NCBI-GeneID:
121313255
NCBI-ProteinID:
XP_041101528
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All DBs
Position
3:58962355..58980951
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AA seq
725 aa
AA seq
DB search
MQKLLRLGFFVFCLEVIGVPLIQGHSAFTCEPIQVHRCLGMHYNMTFFPNIMEHYDQDIA
AKKMEPFVPLISLGCSPDVHKFMCEAFVPACTDQNKVIHPCRSLCERVHSDCAKVIDTFG
VTWPPELECGRLEECRGSLPGTPAPSTKHAVTQKTAQPVQRDYGFWCPLKLKTPVGQSSM
FLGVSDCAPPCANMYFTSDEIKFAKNFIGILSIICLCATLFTFFTFLIDVKRFRYPERPI
IFYAVCYSIVSLIYFTGFLLDNSTACNKSNEKLGRMETVVQGSQNKACTVLFMLLYFFST
AGTVWWVILTITWFLAAGPKWSCEAIEKKAVWFHSSAWGIPGALTVMLLAMNKVEGDSIS
GVCFVGLYDLDALRYFVLAPLCTGVVVGLSLLLAGIISLNHVRRVIQHDERNQEKLKKFM
IRIGVFSCLYLVPLVTLLGCYIYEQGHRTTWEMTWVNDHCEEYHIPCRPYQIKTLARPDL
SLFLVKYLMTLIVGISAVFWVSSKKTCSEWALFFNKTRKRDPISESRKVLQESCEFFLKQ
NSRVQHKKKHYKPSSHKLRVISKSMGTSTGATANHGTSAVGITNHDVLAQATFSEIRASS
DTSGKELAEQGSSTRANQPRSKSRERSPSGQALTSRGLSEDVMEKRSKAGSSGKVSSLSE
SLQRVPDGRMTPRSDFLEGRPVQSSHPLRHSSSQHSSIKGSTSFLVHIVPEEKSEQNQDN
SCSNA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattgctgagattgggattttttgtgttctgtttggaggtgattggggtaccc
ctgatccaaggacacagcgctttcacttgtgaacccatccaagttcacagatgtcttgga
atgcactacaacatgacattttttcctaatataatggaacattatgaccaagatattgct
gccaaaaaaatggagccgtttgttccactgatcagtctcggctgttctccagatgtccac
aagtttatgtgtgaggcatttgtgccagcctgcactgatcaaaacaaagtgattcacccg
tgcaggagcctgtgtgagcgagtgcactctgactgcgcaaaggtgatcgatacttttgga
gtcacatggcccccggagcttgaatgtggaaggttggaagaatgtcgaggttctctgcct
ggtactccggctccttccactaagcatgcggtcacccagaagacagcccagcctgtgcag
agggactacggattctggtgtcctctgaaactcaagaccccggttggccagagttccatg
tttctgggagtgagtgactgcgcaccgccatgtgcgaacatgtacttcacaagcgatgaa
atcaaatttgccaagaacttcattgggattctttccatcatctgcctttgcgcaacgctg
tttaccttctttactttcctaattgacgtcaagaggttcagataccctgagcgtccgatc
atcttctacgccgtgtgttacagcatcgtctccttaatctacttcacagggttcctgctg
gataacagtacagcttgcaacaagtctaatgagaagctggggcgcatggaaactgtagtc
cagggctcacagaacaaggcctgcactgtcctctttatgctgctttatttcttttccaca
gctggaacagtgtggtgggttattctgaccattacttggtttctggctgcggggcccaag
tggagctgtgaagctattgagaagaaggcagtgtggttccactcctcggcttgggggatt
cccggggctttgacggtaatgttgctggccatgaacaaagtggagggtgacagtatcagc
ggggtgtgcttcgtggggctgtatgacctggacgcactgcgctacttcgtactggccccc
ctgtgcactggtgtggttgtgggtctgtctctgctcttggctggcatcatctccctcaat
cacgtgcgacgggtgatccagcacgacgagaggaaccaggagaagctgaagaagttcatg
atccggatcggcgtattcagctgtctttatctggtgcctttggttaccctgctggggtgc
tacatctacgaacaaggtcaccggaccacttgggaaatgacatgggtcaatgaccattgc
gaagagtaccacatcccctgccgaccttaccagattaagacattagcaagaccggatctt
tccctgtttctggtcaaatatctgatgaccctaatcgttggcatctctgccgtcttttgg
gtcagcagtaagaagacatgttcagaatgggcattgttcttcaacaagactcgcaagaga
gatcccatcagcgagagtcgaaaagtgctgcaagaatcctgtgagtttttcttaaaacaa
aactccagagtgcagcacaaaaagaagcactacaagccaagctcccacaagctgagggtc
atctcaaagtcgatggggaccagcacaggagcaacagcaaaccacggcacgtctgcagtc
ggcatcaccaatcatgacgttttagcccaggccacattctccgagatcagggcttcatcg
gatacttctgggaaagagctcgcagagcagggcagttcaactcgggcaaaccagcctcgg
tcaaaatccagggaacggtcaccctccggccaggcgttgacgtcacgtggtttgtctgag
gatgtaatggagaagaggagcaaagctgggagctctggcaaagtaagcagcctctctgag
agtttgcagcgagtccctgatggaagaatgacccccagaagtgattttctggagggtcgt
ccagtacaaagcagtcatcctctgcgtcacagctcttcacagcacagcagcatcaaggga
tccacttcgttccttgttcatattgttcctgaagagaagagcgagcaaaatcaggacaac
agctgctcaaatgcctga
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