Polyodon spathula (Mississippi paddlefish): 121313257
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Entry
121313257 CDS
T07273
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121313257
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121313257
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Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
121313257
NCBI-ProteinID:
XP_041101531
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Position
3:58986853..58995746
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AA seq
256 aa
AA seq
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MATLLARLFLFTWLILPFCATEKARQRERALRQRDADYIERCTGRDMGSQNCTRNRTEAS
QPFHYNGCMQGPAGTPGRDGNPGTNGIPGTPGFPGRDGLKGEKGECVRESFEEPWKPNFK
QCAWKSLNYGIDLGKIAECTFTKMRTDSALRVVFSGSLRLKCKNACCQRWYFTFNGAECT
GPLPIEAIIYLDQGSPEFNSTINIHRTSSVEGLCEGIHAGLVDVAVWVGICPDYPRGDAS
TGWNSVSRVIIEELSK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccactcttctggctcgactgttcctttttacctggctaatcctgcctttctgtgcg
accgaaaaagcgagacagagagagagagctcttcgccagagggatgctgattatattgaa
agatgcactggaagagatatgggaagccagaattgtaccagaaacagaactgaagcctca
cagccttttcattataatggctgcatgcagggcccagctggcacccctggtagagacggg
aaccctggaacgaacggcatccctggcacaccaggcttccctggtcgtgatggtctgaaa
ggggagaagggggagtgcgtgagggagagctttgaggagccatggaaaccaaatttcaag
cagtgtgcatggaaatcccttaactatggtattgaccttggcaaaatcgcagaatgtact
ttcacaaagatgcgcactgacagcgctctgagggtagtctttagtggctctctcagactc
aaatgtaaaaatgcctgctgccagcgctggtacttcacatttaatggggcagagtgcaca
ggaccactgccgattgaagccattatctacctggaccaaggcagccccgagtttaactcc
actataaacatacacaggacctcttcagtggaagggctgtgcgaagggatccatgccggt
ctggtggacgttgctgtgtgggttggtatttgtccagactatcctcgcggagatgcttcc
actggctggaattctgtgtctagagtcatcattgaagaactctccaagtga
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