Polyodon spathula (Mississippi paddlefish): 121313278
Help
Entry
121313278 CDS
T07273
Name
(RefSeq) double-strand-break repair protein rad21 homolog
KO
K06670
cohesin complex subunit SCC1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121313278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121313278
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121313278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
ATHILA
CobT
Motif
Other DBs
NCBI-GeneID:
121313278
NCBI-ProteinID:
XP_041101581
LinkDB
All DBs
Position
3:complement(62043233..62069607)
Genome browser
AA seq
630 aa
AA seq
DB search
MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL
LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP
LPDLDDIDVAQQFTLNQSRVEEITMREEVGTVNLLQENDFADFGMDDREMMREESAFEVD
IIGTSSNLLLEPDPNTSQLNDKTNHLEYDDQYKDDTFGDNPMDTNDGGILVDKLLNEDGG
IFDDPPAMTESVMMPQEHAHDDDDFDMSPGGPDSPDSVDPVEPLPTMTDQTTLVPNEEEA
FALEPIDITVKETKAKRKRKLIVDSVKELDSKSIRAQLSDYSDIVTTLDLAPPTKKLMMW
KETGGVEKLFSLPAQPLWNSRLLKMFTRCLTPLVPDELRKRRKGGEADSLDEFLKEFENP
EVPREEQLQQRDIIDQTILEEPSRLQDSAMEGSRTTLDESVMPPPPQQRGQKCKSQEPEP
ALPLGALEQQPELHQPPQLEIPSVVLPPEEPQNITDLIPELDILMEKGKEKEKDDEEEEE
EEVQGGDQDQEERRWNKRTQQMLHGLQRALAKTGADSISLLELCRNNNKKQAAAKFYSFL
VLKKQQAIELTQEEPYSDIVATPGPRFHII
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgcccactttgtcctaagcaagagagggccgttagccaaaatttggttagcg
gcccattgggataagaaactcaccaaagctcatgtgtttgagtgtaatctggagagcagt
gtggaaagcatcatctcccccaaggtgaaaatggccctgaggacctcgggccatctactc
ttgggggttgtaagaatctaccacaggaaagccaaataccttcttgcagattgtaatgaa
gcattcatcaagatcaaaatggcttttcgcccaggtgtggtggatttgcctgaagagaac
agagaggcagcttacaatgcaatcacactgcctgaagagttccacgattttgaccagccc
ttgcctgatctagatgatattgacgttgcacagcagtttacactgaatcagagcagagta
gaagaaatcaccatgagagaggaagtgggaaccgtgaatctcttgcaagaaaatgacttc
gctgattttggcatggatgatcgggaaatgatgcgagaagaaagtgcatttgaagttgac
ataataggcacttcatccaatcttctgcttgagcctgaccccaacacaagtcagctgaac
gataagacaaaccacctggaatatgatgatcagtataaagatgatacctttggagacaat
cccatggataccaatgatggcgggatcttggttgacaaacttctgaatgaagatggaggc
atttttgatgaccctcctgctatgacagaaagtgtaatgatgccccaagaacatgcacat
gacgacgatgattttgatatgtcacctgggggacctgatagtccagactctgtggatcca
gttgagccccttccaactatgactgatcagacaactctagtacccaacgaagaggaagct
tttgctctggaacccattgatatcactgttaaagaaaccaaagctaaaaggaagaggaaa
ctgattgtggacagtgtaaaggaactggacagcaaatccatccgtgcgcagctcagcgat
tactccgacattgtcacaacgcttgaccttgctcctccaacgaagaagcttatgatgtgg
aaggagacgggtggtgtcgagaagctgttctcgctgcctgcacagccactgtggaatagc
aggttacttaagatgtttacacgctgccttactccactggtaccagatgaattgagaaag
aggagaaagggtggggaagcagacagtctggatgaattcctcaaggagtttgagaatcca
gaggtgccaagagaagagcaactgcagcagcgagacatcattgatcagactattttggaa
gaaccaagccgtctgcaggactctgcgatggagggcagcaggaccacccttgatgagtct
gttatgccaccaccgccacaacaaaggggacagaagtgcaaatcccaagagcctgagcca
gccctgcctcttggtgctctcgaacaacagcccgaactgcatcaaccaccacagctagag
atcccatctgtggtgctcccgccagaggagccacagaacatcactgacctgatccccgag
ttggacatcctgatggaaaaggggaaagaaaaagagaaggatgatgaggaagaggaggag
gaagaggttcaaggaggtgaccaggaccaagaggaaagaagatggaacaagagaactcag
cagatgcttcatggcttgcagagagctttggccaaaacgggagccgactcgatcagtctt
ttggagctgtgtcgaaacaacaacaaaaaacaagcggcagcaaaattctacagcttcttg
gtacttaaaaaacagcaggccattgagctcacacaagaagaaccttacagtgatatcgtc
gccacaccaggaccaagattccatattatataa
DBGET
integrated database retrieval system
