Polyodon spathula (Mississippi paddlefish): 121313293
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Entry
121313293 CDS
T07273
Name
(RefSeq) beta-1-syntrophin-like
KO
K24064
beta-syntrophin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121313293
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Motif
Pfam:
PH_17
PH
PDZ
PDZ_6
PDZ_2
PH_9
Motif
Other DBs
NCBI-GeneID:
121313293
NCBI-ProteinID:
XP_041101610
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Position
3:complement(62968859..63047385)
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AA seq
530 aa
AA seq
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MAVATAVSTSIVQKSGFLEVLVRDRWHKVLANLREETLTLSCEDFGENVNFNGITNGSHG
SNSSGHPHPTNSPKTTVRTAFTDLPEQVPEAIANQKRCVKVVKQEIGGLGISIKGGKENK
MPILISKIFKSLAADQTQVLFVGDAILSVNGVNLRDATHDEAVQALKRAGKEVTLEVKYM
REATPYVKKGSPVSEIGWETPPPESPRLGSASSKPPSPPAFSLHGDKRYISLKMCYVTQS
LTRLDPENRQFELHSPDARHTVVLRCKDSATAQGWFSAIQSNAINSVAKVIAEVKEQTGR
TGIAGSQEIRHLGWLAKKLEHEKQHWKPVLVVVTEKDLLLYDSMPRMKEAWYSPAHTYPL
LATRLVHSGPGMGSPQPGVKLSFATRTGTRHGIESHLFRAETSKELSEWTRHIVQACHNS
VELVKEITTSCTYKNQECRLTIHYEQGFNVSADLQEGALLKSLFNYPFEKLKMSSDDGVR
MFILDFGGKEGEIQLDLHSCPKPIVFILHSFLSAKIARLGLVAQDRLAAE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcaacagcagtatcaacaagcatagtgcaaaaaagtgggtttctggaagtt
ttagtccgcgatcggtggcacaaagtgttggcaaacttaagggaagaaacgctaacgttg
agctgcgaggattttggggagaatgtcaactttaacggcatcaccaatggatctcacggg
agcaactcctctggtcaccctcatcccacaaatagtcccaaaactacagtgcggaccgct
ttcactgatttgccggagcaagtgccagaagcgatcgctaaccagaaaaggtgcgtgaag
gtcgtgaagcaagagatcggagggctagggatcagcatcaaaggggggaaggagaacaag
atgccgattctgatcagcaagattttcaaaagtctagctgcagaccagacccaggttctg
tttgtaggggatgcgatcctgtctgtgaacggagtgaacctgagggacgccactcacgat
gaagcagttcaagcattgaaaagagctgggaaagaggtgacactggaagtgaagtacatg
cgggaggcaaccccctatgtgaagaaaggatctccagtctctgaaattggatgggagaca
cccccaccggagtcccctcgcctaggcagtgcctcctccaagcctccctctcctccagcc
ttctctctccatggagacaagagatacatatcactgaaaatgtgctatgtcacgcagagt
ttgaccagattggacccagagaacaggcagtttgaacttcactccccagatgccaggcac
accgtggtcctgagatgcaaagactcagccacagcacagggctggtttagtgctatacaa
tccaacgctattaactcagttgccaaggttatagcagaagtcaaagagcagactggaaga
actgggatcgctgggagtcaagaaatacgacatctaggctggcttgcaaaaaagctggag
catgagaagcagcactggaagccggttttggtggttgtaactgagaaagacctgcttctg
tatgacagcatgccaagaatgaaggaggcctggtacagccctgctcacacctaccctctg
ctggctaccaggcttgttcattcaggtccagggatggggtcaccacagccaggagtaaaa
ctgtcctttgcaactcgaacaggcaccagacatggcatcgagtcccatctattcagagca
gagaccagcaaggagctgtctgagtggaccaggcacatagtacaggcctgccacaactca
gtcgagcttgtaaaggaaatcaccacaagttgtacatacaagaaccaagaatgccgtctg
actattcactacgagcaagggttcaatgtgtcagctgatctgcaggaaggggctttgtta
aaatccctttttaattatccttttgagaaattgaaaatgtcctcggatgatggtgtgagg
atgtttattttagactttggaggaaaggagggtgaaattcaactcgatctccacagttgt
ccgaagcccatcgtttttattcttcattcatttctctctgcaaagattgcacgactcggc
ttggtggcacaagacagattggctgctgagtga
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