Polyodon spathula (Mississippi paddlefish): 121313298
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Entry
121313298 CDS
T07273
Name
(RefSeq) zinc fingers and homeoboxes protein 1-like
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121313298
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121313298
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf_C2H2_ZHX
Homez
HTH_71
TerB_C
zf-C2H2_2
zf-C2H2_ZNF462_11
Motif
Other DBs
NCBI-GeneID:
121313298
NCBI-ProteinID:
XP_041101618
LinkDB
All DBs
Position
3:complement(63545995..63561349)
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AA seq
966 aa
AA seq
DB search
MASKRKSTTPCMVLPMQTEEQYPDVDMEERLEVPNDVPVENPVALAAESVSSDEDMPETD
NLLDTDSKRIEGGYECKYCSFQTTDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA
LSDHNLRYHNKDDNFMLTMVKRNNQTVFEQTVSDLTFDGNFVQQENEESEDAMAVGIPFS
KTPIMKMKNKAEPKRIAVTPKAADDHEVHKESESEQEPKKMPAVDMPVIDIPAAVMPALD
PPAIMPTLDVPAVLMTAVNTPAVKPTVDTPAVNTPSPAEMPALPAPVEPAKPSVVINPPP
QNLNKTIIGSATVLPAGLAQVLSALQNQQSSKTQVLIPVSSIPTYNGSMDNNAVLVNTYN
KFPYPTLSEIVGLSFQTKYTEEQIKIWFSAQRLKHGVSWTPEEVDEARRKHFNGTVHTMP
QTITVIPAHLSAARNGLQPILQTCQIVGQPGLVLTQVGGANPMPVTTPITLTVANVNNQV
QLPKPATQVTPAFVETKRAPTVQPPPLTPQENSALGPDFFGLRPKKSKEQLAEMKASYLK
QQHPSDGEIARLMRLTRLTKGEIKKWFSDTRYNQRNSKNNHLIASSEHNNNNNNNNNNNS
SSSSSTTTIVIDSSDETTGSPTLGPVREPRKQSWNTFPDFTLQKFKEKTAEQLQVLEESF
QKSITPTDDELNRLRSETKLTRREIDAWFTEKRKTPESGETKHDGKESEMAKVTVAIKTE
TQTPSSSGKAKSGRDKIGKKTPEQLHILKSAFVRTQWPSSEEYQKLSEESGLPRAYIVSW
FGDTRYAWKNGNLKWYYYYQSGNISAINGSGYRRRGRGRSKGRGRGRPRGRPRATKRSAS
WSRSPAVMKFKTGKDILKEYYLKHTFLNEQDLDELVSKSNMGYEQVRDWFAEIRRREDMG
ADLFDDSGENEEPEEESQEENQVAVGGGESHGAGGGLDDDDDDETDDSDTWEPPRHVRRR
LSRSDD
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaagagaaaatccacaacaccatgtatggtcctcccaatgcagacggaggag
cagtatccagatgtggacatggaggaaaggcttgaggtaccaaatgatgttcctgttgag
aatccggttgctcttgctgcagaaagtgtatccagtgatgaggacatgcctgaaactgat
aatttattagacacagattcaaaaaggattgaaggaggctacgagtgtaaatactgcagc
tttcagacgaccgatctcaacatgtttacatttcatgttgattctgagcatccaaatgtg
gttttgaactcctcttatgtctgtgtggagtgtaactttttaactaagagatacgatgcc
ctctcggaccacaacctgcgctaccacaacaaggatgacaatttcatgctgacaatggtg
aaacgcaacaaccagactgtctttgagcagacggttagtgacctcacctttgacggcaat
tttgtgcagcaggagaacgaggagagcgaagatgcaatggcagtgggaattccgttcagc
aaaaccccaatcatgaaaatgaagaataaagccgagcctaagaggatagctgtgacacct
aaagctgctgatgaccatgaagtccacaaagaaagtgaaagtgagcaagagcctaaaaag
atgccggctgtcgatatgccagttatcgatatacctgctgcagttatgccggctcttgat
ccgccagctattatgcccactcttgatgtgccagctgttcttatgacagctgtcaatacg
ccagctgttaagcccactgtcgatacaccagctgtgaatacgcccagtccagctgaaatg
ccagcactaccggctccagtggaacctgcaaagccaagcgttgtcatcaacccaccgcca
cagaatttaaacaagacaataattggttctgccacagttcttcctgcagggttggcccag
gttctatctgctctgcagaaccaacaaagttccaaaactcaagtcttgatccctgtcagc
agcattccaacctacaatggctctatggacaacaacgctgtgctggttaacacttacaac
aaattcccttacccaacactatctgagattgtggggctgtcattccagaccaagtacaca
gaggagcagataaagatctggttttctgcccagcgccttaagcatggagtcagctggacg
ccagaggaggtggatgaggccaggagaaagcatttcaatggcacagtgcacaccatgcca
cagaccatcacagtcattccagcacacctctcggctgccagaaatggtctccagcccatc
cttcagacctgccaaatagtgggccaaccaggccttgttctgacacaagttggtggtgca
aaccctatgccagtaaccaccccaatcactctgactgtcgcgaatgtcaacaatcaagta
cagctgccaaaacctgccacccaggtgaccccagcctttgtggaaaccaaacgtgctccc
actgtccaacctcctccactgactcctcaggaaaactctgccctgggccctgacttcttc
ggtttacgtccaaaaaagtctaaggagcagctagccgagatgaaggccagctacttgaag
caacagcaccccagcgacggggaaatcgcccggctcatgagattgacaagactcacaaag
ggggagattaagaagtggttcagtgacacaaggtacaaccagcgcaattcaaagaacaac
catcttattgcctccagtgaacacaacaacaacaacaacaacaacaacaacaacaacagc
agcagcagcagcagcaccaccaccatagtgattgactcaagcgacgaaactacagggtcc
ccaacgttgggtcctgtcagggagccacgtaaacagtcttggaatactttccctgacttt
accctacagaagttcaaggaaaagacggccgagcagcttcaggtgctggaggaaagtttt
cagaagagcatcacacccacagacgatgaactaaataggctgagatcagagaccaagcta
accagacgagagattgatgcctggttcacagaaaagagaaagacaccagaatcgggagaa
acaaaacacgatgggaaggagagtgaaatggccaaagttactgtcgctatcaaaacggag
acacagactccgtcttccagtggcaaagccaagtctggcagggacaagattggcaagaag
accccagagcaactgcacattctaaagagtgcatttgtgcgtacccagtggccctcgtcg
gaggagtatcaaaagctctcagaagaaagtggccttcccagggcctacattgttagttgg
tttggggacacgagatatgcttggaaaaatggcaacttgaagtggtattattactaccag
agcggcaacatcagcgctattaacgggagtgggtacaggaggagaggaagaggaagatct
aaaggcagggggcgcggaaggcccagaggaagaccaagggctacgaagcgttcagctagc
tggagtaggtcccctgcggtgatgaagttcaaaacgggaaaagacatcctcaaagagtat
tatttgaagcatacatttctaaatgaacaagacctggacgaactggtttcaaagtctaac
atgggctacgagcaggtccgggactggttcgcagagattcggaggcgagaggacatgggt
gcagatctatttgatgacagtggggaaaatgaggagccagaggaggaatcgcaggaagaa
aaccaagtggcagttggtggaggagaaagtcatggtgctggggggggtttagatgacgat
gacgacgatgaaacagatgatagtgacacttgggagcctccacgacatgtcagacgaagg
ctgtccaggtcagatgattag
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