Polyodon spathula (Mississippi paddlefish): 121313321
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Entry
121313321 CDS
T07273
Name
(RefSeq) teashirt homolog 1-like
KO
K09236
teashirt
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121313321
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121313321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2_2
zf-C2H2
zf-C2H2_6
zf-C2H2_3rep
zf-met
Zap1_zf1
Zf-C2H2_ZNF451
Homeobox_KN
zf-C2HC_2
Phage_zn_bind_6
zf-C2H2_12
DUF7410
Motif
Other DBs
NCBI-GeneID:
121313321
NCBI-ProteinID:
XP_041101657
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All DBs
Position
3:65017094..65053743
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AA seq
1057 aa
AA seq
DB search
MTRRKQQVPRRSAAYVPEEELKAAEIDEDDGLSLDAQDNEYICNEEEESKDAPSYQNSPL
STVTNQDAGYGSPLSDTSDRLADFKSTSSKDGHDKEEASSMDNGLTIQDSLAQMKAVYAN
LISDSSWSSITVDIMKAKPVSASTSSNGSSHNGSNNTSNGGGLTYDWHQAALAKTLQHTP
YSLLPEPSLFSTVQLYRQNSKLYGSVFTGASKFRCKDCSAAYDTLVGLTVHMNDTGHYRD
DNKDKEADNRKKWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ
KVPLKEPVPALTKLVPSTKKRALQDFVSPCSPESVSSTPGVPMGEPTKDQKTANPYVTPN
NRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFIKVTNSASKKGK
QLVFDPVVEEKIQSIPLPPTTTRLPLPNIKSQPDSPAHSSNSEEKREPDDEPLEAQEPEK
KIKEEKEDPDEKFESNTPYEYLREEDLEETPKGGMDILKSLENTVSSAISKAQTGAPTWG
GYPSIHAAYQLQGSVKSVQSTVQSIQVQPSFTNNMKTLSSEHTALIHSPGNMSPPLHKSN
VSAMEELVEKVTGKITVKKEEKAVEKCKLLQIKPLSLTSKENKDLPKPDDLNRKPAKKNN
IAEAELPNPHKEGQLDNHIKNGTEALKSPVSNGCNSLGIITDHSPEQPFVNPLSALQSIM
NTHLGKAAKPISPTLDPLAMLYKISNSVLEKPIYPTTQVKQADPINRYYYESNDQPIDLT
KSKNNNSNNTNSSSRPIISSLTESISSPLRENALMDISDMVKNLTGRLTPKSSTPSSVSE
KSDADGSTFEDALEELSPVQKRKGRQSNWNPQHLLILQAQFASSLRETPEGKYVMTDLGP
QERVHICKFTGLSMTTISHWLANVKYQLRRTGGTKFIKNIDSGHPVFLCNDCASQFRTPS
TYINHLESHLGFSLKDLSKLSLDHVREQQTVSKVITEKTLGSHGFSEEDSGSLFQCKLCN
RTFASKHAVKLHLSKTHGKSPEDHLVYVNELDKFEKK
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggagaaagcagcaagtaccgaggcggtctgcagcatatgtgcctgaggaggag
ctgaaagcagcagaaattgatgaggatgatggactgtctttagacgcccaggacaatgaa
tacatatgtaacgaggaagaagaaagcaaggatgctccaagctatcaaaactcccctctc
agcaccgtgaccaatcaggatgcagggtacgggtctccccttagtgacaccagtgataga
ctggcagactttaagagcacttcctcaaaagatggccatgacaaggaggaggcctccagc
atggacaatggtctcaccatccaagacagcttagctcaaatgaaagctgtgtatgcaaac
ttgatctctgattcctcttggtccagtattactgtggatataatgaaagccaagccggtg
agtgccagcaccagcagtaatggtagcagccacaatggaagcaacaacacaagcaatggg
ggagggttaacctatgactggcatcaagctgctttagccaaaaccttgcagcacactcct
tatagtttacttcctgagccaagcttattcagtacagtgcagctttacaggcagaacagt
aaactgtatggatcagtgttcactggcgctagtaaatttcgatgcaaggactgcagtgca
gcctatgacacacttgtggggctgacggtacacatgaacgatactggccactaccgggat
gacaacaaagacaaggaagctgacaaccgtaagaagtggtcgaaaccgagaaagcggtcc
ttgatggagatggaagggaaggaggatgcacaaaaagtgctaaagtgcatgtactgcggg
cactcctttgagtctttgcaagacctgagtgtccacatgatcaaaacaaagcattaccag
aaagtgcctcttaaagaaccagtgccagctctcaccaaactggttccttctaccaaaaaa
cgagcacttcaggactttgtctccccctgctctccagagtctgtaagtagcacaccaggt
gtcccaatgggcgagcccacaaaagatcagaaaactgcaaacccgtacgtaactcccaac
aaccgctacggctatcagaatggtgccagttacacctggcagtttgaggccaggaaagcc
cagatattgaaatgcatggagtgtggaagctctcatgatactctacagcaacttacagct
cacatgatggtcaccggccatttcatcaaggtgaccaactctgcttctaagaaggggaaa
cagctggtctttgacccagtggtagaagaaaagattcagtctattcctttgccacccact
actacacggctgccattgccaaatatcaaatcacagccagattctccagctcattcatca
aactctgaggaaaagagagaaccagacgatgagccattggaagcccaggaaccagagaag
aaaatcaaagaggagaaagaggaccctgatgagaagtttgagtccaacacaccctatgag
tatctccgtgaagaggacctggaagagaccccaaaaggtggaatggatatcctgaaatcc
ctggagaacacagtctcaagtgcaatcagtaaggcccaaactggagccccaacatgggga
gggtatcctagcattcatgcagcataccagctccaaggttcagtgaagtctgtccagtcc
acagtgcagagcatccaagtgcagccctctttcactaataacatgaaaacattgtcctcg
gaacacactgcactgatccattcccctggtaatatgtccccgcccctccacaagagcaat
gtctctgccatggaggagctagttgagaaggtgacagggaaaataactgtgaagaaagaa
gaaaaggctgtggaaaaatgcaaactgctccagatcaaacccttgtctctgacctctaaa
gagaacaaggacttgcccaagcctgacgacctcaacagaaagccagcgaaaaagaacaac
attgcagaggcagagctcccaaatccacataaagagggccagctggataatcacatcaaa
aatggcacagaggccctgaagtcaccagtcagtaatggttgtaacagtttgggaatcatt
acagaccattcaccggaacagccttttgtgaatcccctaagcgcattgcagtctattatg
aacactcatttaggtaaagcagcaaagccaataagcccaaccttggatcccttggctatg
ttgtacaaaattagcaacagcgttttagagaagcccatctatcccacaactcaggtcaag
caagccgatcccatcaacaggtactactatgaaagtaatgaccagccgatcgacttgaca
aaatccaagaacaacaacagtaacaataccaacagtagcagtaggcccattatttccagc
ctgacagaatcaatttcatcccctctgagggagaatgcactgatggacatttcagacatg
gtgaaaaacctcaccgggcgcttaacgccaaagtcgtccacaccgtcatctgtgtcggaa
aagtctgacgctgatgggagcacctttgaggatgctttagaggagctttcccccgtccaa
aaacggaagggccggcagtcgaactggaacccacagcatctcctcattcttcaggcccag
ttcgcatctagcctgagggagaccccagagggcaaatacgtaatgacagacctgggccca
caggagcgggtccacatctgcaagtttactggtctctccatgaccaccatcagccattgg
ttggccaacgtaaagtatcaattgaggaggacaggtggaaccaaattcataaagaatata
gactcaggtcacccagtattcctctgcaacgattgtgcctctcagttcaggactccttcc
acctacattaaccacttagagtctcacctaggcttcagcttgaaggacctctccaagctg
tctttggaccatgtccgggagcagcagactgtttcaaaggtcataactgaaaagacactt
ggctcacatgggttctctgaagaggactcaggctctttattccagtgtaagctgtgcaac
cggactttcgccagtaagcatgcagtcaaactgcacctcagcaaaacacatggcaagtca
cccgaggaccatctggtgtatgtaaatgaactggataaatttgaaaaaaagtag
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integrated database retrieval system
