Polyodon spathula (Mississippi paddlefish): 121313324
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Entry
121313324 CDS
T07273
Name
(RefSeq) microtubule-associated protein 1B-like
KO
K10429
microtubule-associated protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121313324
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121313324
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121313324
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121313324
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
121313324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
PsbW
Motif
Other DBs
NCBI-GeneID:
121313324
NCBI-ProteinID:
XP_041101664
LinkDB
All DBs
Position
1:7439842..7495471
Genome browser
AA seq
2851 aa
AA seq
DB search
MATIVEAAAVDSEPTCSSNAVASPSSSNLSHRFLDNKFYLLVVIGEIVTDEQLRCAIADI
QRGIRSWDTNLIECNLDDELKLFVSRHSARFSPDVRGQKILHHKSDVLETVVLMNPSDEA
VSTEVRLMITDTARHKLLVLSGQCFENTGELILQSGSFSFLNFIDIFTDQEIGELLSTIH
PANKASLTLFCPEEGDWKNSNLDKHNLQDFINMKLNSSSILPEMEGLSEFTEYLSESVEI
SSPFDILEPPTSGGFLKLSKPCCYIFPGGRGDSALFAVNGFNMLINGGSDRKSCFWKLVR
HLDRVDSILLTHIGDDNLPGINSMLQRKVAELEEEQSQGSTANSDWMKNLISPDLGVVFL
NVPEDLKNPEPNFRVRRSIEEASLTLQYLNKLSLKPEPLNRGVGNDIDPIILFQKMGVGR
LEMYVLNPVKNSKELQYFMKQWTGSSKDKASVLLPSGKESEIPVSYLTSISSLIVWHPAN
PTEKIVRVLFPGNASQHNILEGLEKLKHLDFLKQPVVSQKELTANIAAPGLKQAKLKHKT
DSIESLKPTSRPSSSRGVRKESKEEPSEAAKADTQEKTQTTEKKVKTTVKKEKPKPPVTE
KEAKSKLEQPLPTETPDKRKADIKPKVVKERVVKKEAKAQKSEEKKKEEVKKEAAKKEVK
KEEIKELKKDLKKEVKKEGKKEVKKETPKKEVPKEEKKELKKEDKDLKKDMKKAPKDMKK
TATPQADAKKPVPKPKVQKKEESSRKDLGSPGKTKEKGKIKSTKKDNKPSESKLVAAAAA
GAMASVAAVTATVEALEAERSLMSTPEDLTKDFEELKAEQITEDVESKPLHEQPAEDEEA
VMVQHEEIMVIKESEEPVESPDEGITTTEAEGECGQTPDELESRENINDDINEKFEDEGT
GFEELSEAGDYEETAETEEVEQEEEVVEERTEKKHDNVIKGELVDTEAKDLAEADEQTKP
EHVLEKGKSRDSESGEDQAEEDLEETLVKEGEESEEEEAEEDEDKGIKREGDVDEAERDT
RDFEIEETKEKHSLPATTPPKMPAPQSPVIEHASIHDETLPAGSESEATVSDEENREEPP
EEFTATSGYTQSTIEISSEPTPMDEMSTPRDVMSDETTNEETESPSQEYVKFGMTAYSSE
QDRTKLSPLPDSFNEYSSDHSKSEATEGNVYHHSASTISPPSSIEEDKVYKTLPSEILTP
KENESEYGLHLDTRDKLFLDTRSSPAPLSPQAKTPTSERSVNFDLTPTAIAAPIELGTTL
SEVTSDVMDHSASPDDKTLEVASPTQSVPGSAGHTPYYQSPVDETTSSVPATGKTPGPII
VEVTDEKGEPSNNRVSPMDEPVPDSEFPVEKVLSPLRSPPPLGSGSPTEGSPNADAKSPF
DISEPSLDVKHGNNKSPSSLNPFVDCSSASSVSVLQEKQEAACLDLEPGKDSFSPENKLQ
DNASAGSKSLEAFQEIKPSTDLSPISVDANQFGSFKEESKMSISEETTSDKSATPADEVV
AEDTFSHIEGVASTSTASLATSSFPEPTADDVSHSLHAEVGSPHSTEVDDSLSVSVVQTP
TAFQDTEISPSKEECPRPMSLSPDFSPKITKYRAPIQDRSPEQSTMSVEFGQESPDHSSA
LDFSKQSPEHPAVSANLHITENGPTEIEYSPSEMPYTKFAEQSMLPVEKPILFQGESSPH
VALTSPKESRLPTPPAHSPSQVTEPCAVSSFVSGGSLASESLTHTFEESLQQQDRESPVT
PRAASPTHSPHSSDSSLILGSSLVPESMSYKAEEPSQMQEKSPTTPKAGSPACSPLSSDS
SFIMESSITPQSLPVKVEEPSQQQDKFSVSPKEASPAYSALSPESALLLGGLVPAGSLSL
KAEELPKHQDQSPVSPKAAPPAYSPLSTDSSLFLGSSVAPRSLPIETEELTEYQDKSPVS
PKVSPPAYSPLSSSSSFLLGSSVDPKSVSIKDDEPTQKQDESPASSKAASPAYSPLSSYS
PLVLGSSQAPESMCFKAEEPSQMQEKSPTIPKAESPACSPLSSDSSFIMESSITPQSLPV
KVEEPSQQQDKFSVSPKEASPAYSALSPESALLLGGLVPAGSLSLKAEELPKHQDHSPIS
PKAAPPAYSPLSTDSSLFLGSSVAPRSLPIETEELTEYQDKSPVSPKVSPPAYSPLSSSS
SFLLGSSVDPKSVSIKDDEPTQKQDESPASSKAASPAYSPLSSYSPLVLGSSQAPESMCF
KAEEPSQMQEKSPTIPKAESPACSPLSSDSSFIMESSITPQSLPVKAEEPSQQQDKFSVS
PKEASPAYSALSPESALFLGGSMPAGSSSLKAEELTEHQDQSPVSPKAAPPAYSPLSTDS
SLFLGSSIAPGSLPMKAKEPAEYQDKSPVIPKDSPPAYSPLSSGSSVLLGSSVVPKSFSV
KDEEPAQKQDKFPASSKAALPAYSPLSSYSAGFEKRCTSSHSPEQESRKLDFTDADSCKK
TLSPQSRHDVDLCLVTSCEYRHPKTELSPSFINPSPLEFFANEDNSQKDDKPLTQSGGGQ
PPSGGKLHPRQCDETPPTSISESAPSQTDSDVPPGTEECPSITADANIDSEDESETLPTD
KTLTYRHMDPPPVPLRDPAPSAPHPDVCMVDPEAISTEQNLGKPLKKDVKEKTKTKKQGT
KTKSSSPARKSDGKTKPSAITKTNAAKEALDKISKVASPKKKDSTGSKSSANSDIKHSEE
KDAKNATNTSASKGTKSATTGSGNSKASSGAAAPPGPPVYMDMVYIPNHCSAKNVDAEFF
KRVRSSYYVVSGNDLAAEEPSRSVLDSLLEGKAQWGNNMQVTLIPTHDSEVMRDWYQQTH
EKQQDLNIMVLASSSTVVMQDESFSACKIEL
NT seq
8556 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgatagtggaagcagcagcagtagactctgagcctacttgtagtagcaatgca
gtagcgtctccatcatcttcaaacctttcccaccggtttctcgacaataaattctatttg
ctggtggttattggagagattgttaccgacgaacaactgaggtgtgccattgcagatata
cagcgaggaatccgctcttgggacacaaacctcattgaatgcaacttagatgacgaactg
aaactctttgtttctcgacattctgcacgattttcgcctgatgttagaggtcagaaaatc
ctgcaccacaaaagcgatgtcctggaaacagtggttctcatgaacccatcagatgaagct
gtcagcacagaggtgcgattgatgatcacagacactgctagacataaactactggttctg
tcaggacagtgctttgaaaacacaggggaactcatactgcagtctggatcattctccttt
ctgaacttcatagacatctttactgatcaggagattggtgaattgcttagcaccatacat
cctgcgaacaaagcaagcctaaccctgttctgccctgaggagggggattggaagaactca
aacctggacaaacacaatctgcaggacttcatcaacatgaagctcaactcgtcctctata
ctgcctgaaatggaaggactttcagagtttacagaatacctctcagagtctgtagagatt
tcatctccattcgacatcctagaaccaccaacctcagggggctttttaaagctctcaaag
ccatgctgctatattttccccggtgggagaggagactcggccctgtttgcggtcaacgga
ttcaacatgctcattaatggagggtcagatcgcaagtcctgtttctggaagcttgtgaga
cacctggatagagtggactcaatacttctgacacacattggagacgacaaccttcctgga
atcaacagcatgctgcagcggaaagtagcagaactagaagaagagcagtcacagggatct
actgccaatagtgactggatgaaaaatctcatctcccccgacctgggagtggtgtttcta
aatgttcctgaggacctgaagaacccagaaccgaattttagggtcagaagaagcattgag
gaggctagtcttacactgcaatacttgaataaattatctttaaaaccagaaccacttaac
agaggtgtcggaaatgatatagatcctatcattctctttcagaaaatgggagtgggacga
ttagaaatgtatgtgctaaacccagttaaaaacagcaaggagctgcagtattttatgaag
cagtggactggcagcagtaaagacaaagcctctgtcttgctcccgagtggcaaagaatct
gagattccagtctcttacttaacctcaatttcgtcgttgattgtatggcatccagctaac
cccactgaaaagatagtacgtgttctgtttccaggcaatgcatctcaacacaatatacta
gaaggcttggaaaaacttaagcatctggacttcctaaagcagccagtggtcagccagaaa
gagctaactgcaaacatcgctgcaccaggtctgaaacaagctaagctgaaacacaagacg
gacagtattgaaagtctaaaaccaacatccagaccatcatcaagcagaggagttaggaaa
gaatcaaaagaagagccgtcagaggcagcaaaagcagacacacaagaaaagacccaaaca
acagagaaaaaggtaaaaacaaccgtgaaaaaagaaaaaccaaagccaccggtgacagag
aaagaggccaagtcaaaattagagcaaccacttccaacagaaaccccagacaagcgcaag
gctgacataaaaccaaaagtggtaaaggaaagggtagttaaaaaggaggccaaggcccag
aaatctgaagaaaagaaaaaagaagaagtaaagaaggaggcagctaagaaagaagtaaaa
aaggaagaaataaaggagttgaaaaaagacctgaaaaaggaagtgaaaaaggaaggaaag
aaagaggtgaagaaggaaacaccaaagaaggaggttccaaaagaagagaagaaagaactg
aaaaaagaagacaaagaccttaaaaaggacatgaagaaagcaccgaaagacatgaagaaa
acagccacccctcaggctgatgccaaaaagcctgtgccaaaaccaaaagtccaaaagaaa
gaagagtcatcaaggaaggatctaggaagcccaggaaaaaccaaagagaagggaaagatc
aagagtaccaagaaagacaacaagcccagtgagtccaaacttgttgccgctgcagcagcc
ggggcgatggctagtgtagcagctgtgacagccacagtggaggctcttgaagctgaacgg
tcacttatgtctacacccgaggatctcactaaagactttgaagaactcaaagctgaacaa
ataacagaagatgtagagagcaaaccactgcatgagcaaccagcagaagatgaagaagct
gtcatggtgcaacatgaggaaataatggtcatcaaagaatctgaggagcctgttgaatct
cctgatgaagggataacaaccacagaagctgagggagagtgcggacagacccccgatgaa
ctggagtcccgagagaacattaatgatgacatcaatgagaagtttgaagatgagggcact
ggttttgaagaattgtcagaagctggagactatgaagaaacagcagagactgaggaggta
gaacaggaggaggaagttgtggaggaaaggacagagaagaagcatgataatgtgatcaag
ggagaattagttgatacagaagcaaaagatcttgctgaagcagatgaacaaaccaaacct
gaacatgtgttggaaaagggaaaatccagggattctgaatcaggagaggatcaagcagag
gaagatttagaagaaacacttgtaaaggaaggggaagaatctgaggaagaagaggcagaa
gaggatgaagataaaggtattaaaagagaaggcgatgtagatgaagctgaacgagacaca
agagattttgagattgaggaaacaaaggaaaaacacagtctgcctgctacaactccaccc
aaaatgcctgcacctcagtcccctgtcattgagcatgcatctattcatgatgaaactcta
ccagctggttctgaaagtgaagccacagtgtctgatgaagagaatcgtgaagaaccacct
gaagaattcacagcaacttcaggttatacacagtctacaattgagatttccagtgagccg
acaccaatggatgaaatgtcaacaccaagagatgttatgagtgacgagaccaccaatgag
gaaaccgagtctccttctcaggagtatgtgaagtttggaatgacagcttactccagtgag
caggacagaaccaaactctctcctcttcctgatagctttaatgaatactcgtcagatcat
tcgaagagcgaagccactgaaggtaatgtttatcatcattcagcctctacaatatcgcca
ccttcatcaatagaggaagacaaagtctacaaaacactgcctagtgaaatccttactccc
aaagaaaacgaaagtgaatacgggttacacctggatactcgggataaattgtttcttgac
acaagatctagtcccgctcctctctcacctcaagcaaaaacacctacaagtgagcgtagt
gtaaactttgatttaactccaaccgcaattgcagcaccaattgaactgggaaccaccctt
tctgaagtcaccagtgatgtgatggatcactctgccagtccagatgacaagaccttagaa
gttgcttctcctacacaatctgttcctggaagtgcaggtcacacaccctattaccagtca
cctgtggatgaaacgacaagctctgtgcccgctactggaaagaccccaggtccaattata
gtcgaagtaactgatgaaaaaggtgaaccttcaaacaacagagttagtccaatggatgaa
cctgtacctgattctgagttccctgttgaaaaggtcttgtctcctcttcgtagtccaccg
ccactgggatctggatctccaacagaagggtcaccaaatgctgatgcaaagtcacccttt
gacatttctgaaccatcattagatgtcaagcatggtaacaataagtcacccagtagctta
aatccctttgtcgactgttcttcagcgagttcagttagtgttttacaggaaaagcaagaa
gcagcttgtctggatttggaacctggaaaagacagtttcagcccggagaacaaactgcag
gataatgcatctgctggaagcaaaagcttggaagcttttcaagaaattaaaccatctact
gatctgtcacccatttcagttgatgctaaccagtttggttctttcaaagaggagagtaaa
atgtcaatttccgaagaaacaacatcagacaaatcagccactccagctgacgaggttgta
gcagaggacacattttctcatatcgaaggagtggcctccacgtcaactgcctctctcgct
acaagctcattccctgaacccacagcagatgatgtctctcattcgctccatgctgaagtg
ggctccccacattcaactgaagtagatgactctttgtctgtatctgtagtacagacaccc
acagcattccaggatacagagatatctccatctaaagaagagtgcccaagaccaatgtca
ctttctccagatttctcacctaaaataacaaaatacagagccccaatacaggacaggtcc
ccagagcagtccaccatgtcagtagaatttggtcaggagtctcctgatcattcttcagct
ttagacttcagcaaacagtcccctgaacatccagcagtcagtgcaaaccttcacatcact
gagaatggacccactgaaattgaatacagtccttctgaaatgccatataccaaatttgca
gagcaatccatgctgccagttgagaaacccatacttttccagggagaaagttctccacat
gtagctttaacatctccaaaagagtctcgtctgcccaccccacctgctcactctccatca
caagtaacagaaccatgtgctgtttcatcatttgtcagtggtggttcactggcctcagag
agtttgacacatacgtttgaggaatctttacagcaacaggacagagagtctcctgttaca
cccagagcagcatcccctacccactcaccacattcctctgattcatcattaatcttagga
agctcactagtaccagaaagcatgtcctataaggcagaggaaccttcacaaatgcaggag
aagtctcctaccaccccaaaagcaggctctcctgcatgctctccactttcttcagattcc
tcatttattatggaaagctcaattacacctcaaagtttgccagttaaagttgaagaacct
tcacaacaacaggacaagttttcagtcagtcccaaagaagcttcccctgcatactcagca
ctgtcccctgaatcggcattgttattaggaggcttagtgcctgcaggaagcctatcacta
aaagcagaggaacttcccaaacatcaagaccagtctcctgttagtccaaaagcagctccc
cctgcatactcaccactttccactgattcatcgttgttcttaggaagttcagttgctcca
agaagcttaccaatagaaacagaagaacttacagaatatcaagacaagtctcctgttagt
cccaaagtttctcctcctgcttactcaccactttcttctagttcatcatttttattagga
agctcagtagatcctaaaagtgtttcaattaaagatgatgaacctacccaaaagcaagac
gagtctccggctagttccaaagcagcttcgccagcatactcaccactatcgtcttattca
ccattagtcttaggaagctcacaagcaccggaaagcatgtgctttaaggcagaggaacct
tcacaaatgcaggagaagtctcctaccatcccaaaagcagaatctcctgcatgctctcca
ctttcttcagattcctcatttattatggaaagctcaattacacctcaaagtttgccagtt
aaagttgaagaaccttcacaacaacaggacaagttttcagtcagtcccaaagaagcttcc
cctgcatactcagcactgtcccctgaatcggcattgttattaggaggcttagtgcctgca
ggaagcctatcactaaaagcagaggaacttcccaaacatcaagaccactctcctattagt
ccaaaagcagctccccctgcatactcaccactttccactgattcatcgttgttcttagga
agttcagttgctccaagaagcttaccaatagaaacagaagaacttacagaatatcaagac
aagtctcctgttagtcccaaagtttctcctcctgcttactcaccactttcttctagttca
tcatttttattaggaagctcagtagatcctaaaagtgtttcaattaaagatgatgaacct
acccaaaagcaagacgagtctccggctagttccaaagcagcttcgccagcatactcacca
ctatcgtcttattcaccattagtcttaggaagctcacaagcaccggaaagcatgtgcttt
aaggcagaggaaccttcacaaatgcaggagaagtctcctaccatcccaaaagcagaatct
cctgcatgctctccactttcttcagattcctcatttattatggaaagctcaattacacct
caaagtttgccagttaaagctgaagaaccttcacagcaacaggacaagttttcagtcagt
cccaaagaagcttcccctgcatactcagcactgtcccctgaatcggcattgttcttagga
ggctcaatgcctgcaggaagctcatcacttaaagcagaggaacttaccgaacatcaagac
cagtctcctgttagtccaaaagcagctccacctgcatactcaccactttccactgattca
tcgttgttcttaggaagctcaattgctccaggaagcttaccaatgaaagcaaaggaacct
gcagaatatcaagacaagtctcctgttattcccaaagattctcctcctgcttactcacca
ctttcttctggttcatcagttttattaggaagctcagtagttccgaaaagtttttcagtt
aaagatgaggaacctgcccaaaagcaagacaagtttcctgctagttccaaagcagctttg
ccagcatactcaccactttcgtcttattcagctggctttgaaaagaggtgtacttcttca
cattctccagaacaggagtctaggaagcttgacttcacagatgcagactcgtgcaaaaag
actctttcaccacagtcccgacatgatgttgacttatgtttggtcacttcttgtgaatac
aggcaccctaaaacagaactgtctccctccttcattaatcccagccccctggaattcttt
gctaatgaggataactctcaaaaagatgacaagcctttaacacagtctggtggaggacag
cccccatctggaggaaagcttcatccaaggcagtgtgatgaaaccccaccaacttcaatt
agcgagtcagccccatctcagacagattcggatgtgcctccaggcactgaagaatgccct
tccattaccgcagatgccaacatagactcagaagatgagtctgaaactcttcctacggac
aaaactcttacatacaggcatatggatcccccaccagtcccgctcagagacccagctcct
tccgctcctcaccctgatgtctgcatggtcgaccctgaagcgatctctactgagcagaac
ctagggaagcccttgaaaaaagatgtcaaagaaaagacaaagaccaaaaagcagggcact
aagaccaagtcttcctcaccagcaaggaaaagcgatggcaagactaaaccgtctgccatc
acaaagactaatgctgcaaaggaagcattagataagatttcaaaagtagcttctccaaag
aagaaagactcaacaggatccaagtcaagtgccaattctgatataaagcattctgaggaa
aaagatgctaagaatgctaccaatacctcggcttcaaagggtacaaaaagtgctaccact
ggttctggtaatagtaaagcttccagtggagcagcagctccccctgggccccctgtatac
atggacatggtatatattccaaaccactgcagtgccaagaatgtggatgctgagtttttc
aagagagtgagatcttcttattatgttgtaagtggcaacgacttggcagctgaagaaccc
agcagatctgtcctggattccctgctggaggggaaggctcagtggggtaacaacatgcag
gtcactctcatcccaacccacgactctgaggtgatgcgggactggtaccagcagactcac
gagaagcagcaggacctgaacatcatggtgttagcaagcagcagcaccgtggtcatgcaa
gacgaatctttctctgcttgcaagattgagctgtaa
DBGET
integrated database retrieval system
