Polyodon spathula (Mississippi paddlefish): 121313331
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Entry
121313331 CDS
T07273
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04148
Efferocytosis
pspa04218
Cellular senescence
pspa04310
Wnt signaling pathway
pspa04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121313331
04310 Wnt signaling pathway
121313331
04020 Calcium signaling pathway
121313331
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121313331
09143 Cell growth and death
04218 Cellular senescence
121313331
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121313331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121313331
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121313331
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
121313331
NCBI-ProteinID:
XP_041101671
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Position
3:66427538..66551741
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AA seq
937 aa
AA seq
DB search
MQNNNSLSVSKFAFGPLVSSALAKETLEFNLFSSFTNMKSAEEEAFNYATPNVSISLPLN
MGNSCLSTYHGIHSSQVMSSNHQAGYMDNGASGYYLSPNIRPNGAPTLESPRIEITPYIG
MHHGNSQYPQEEEIEESIPSAKRPNSIVTLTLPNADNYRDPSCLSPASSLSSRSCNSEAS
SYESGYSCNYDNSPQNSPWQSPCVSPKGTAPEEAYHRGLAACTLLTSPRHSPSTSPRTSV
TDENWLGTRNSRSTSPCGGKRKYSFNGVPYRHPSSYSPHHSPTPSPQTSPRLSVTDETWL
NNTNQYTNSAIVAAINALTTDNMDNMDGIPVKSRKTNVDLSPTMSLKMEPDEEEHGTADL
SPEDFSNRRMPFKKENFCGEFLSVPQNPYTWCKPKSYTSPSLPALDWQLPSCSGPYELQV
DVQPKSHHRAHYETEGSRGAVKASSGGHPIVQLHGYMESEPLTLQLFIGTADDRLLRPHA
FYQVHRITGKTVSTASHEVMLSNTKVLEIPLLPENNMRAIIDCAGILKLRNSDIELRKGE
TDIGRKNTRVRMVFRVHITQPNGRTISLQASSNPIECSQRSAQELPLVENQSMDSFPVTG
GKKMVLSGHNFLPDSKVVFVEKAPDGHHIWEMDAKVDKESIKSTSLVVEVPLYRNQRISS
PIQVNFYVCNGKRKRSQCQRFTYLPANVPIIKTEPTDDYESVASGLSTLSKSYYNQQVLT
SMMPSDPGSCLVASFPSYQQRNIAMSPSSPTSNSSPKLHDLSPSTYTKCNANTGHSQLAS
LQQPTAGIPIIQEVPNKSVVVHPNSPDQSSLIMLQSQVSQHLSSNCSHGYQQSLYPNSPS
SSPVPSAAQETLYVQTYSPPHPSMPMGQQPPQLKKAQQNGSPTNQPGSPPLLQEENSQTS
LPVIVKQEPQELDQMYLDDVNEIIRNDLSSTSIHGHA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcagaataataatagcctgagtgtctcaaagtttgcatttggaccattggtttcttca
gctctggcaaaggaaactttggaatttaatttattctcttccttcaccaacatgaaatct
gcagaagaagaagccttcaactatgcaacacctaatgttagcatctcacttcccctcaac
atgggaaactcctgcttgtcaacataccacggcatccattccagccaagttatgtcttcc
aaccatcaagccgggtatatggacaacggtgcctcgggctactatctgtctcctaacatc
aggccaaatggagcccctaccttggaaagccccaggattgaaatcactccttacattggg
atgcaccatggcaatagccagtacccccaggaagaagagattgaagaaagcatccccagt
gccaagagaccaaactcaattgtcaccctgaccttgcccaatgcggacaactacagagat
cccagctgccttagcccagccagtagtttgtcttccagaagctgcaattcagaagcctct
tcctacgagtcaggctactcatgcaattatgataactccccacagaactctccatggcag
tctccttgcgtttcccccaagggcactgctccagaggaagcctaccaccgtgggctggca
gcctgcacactgctcacctctccaaggcactccccctccacatcccccaggaccagtgtc
acagacgagaactggcttggcacacgcaactcccgatcaacctctccatgtggaggaaag
agaaagtacagcttcaacggcgtcccctacagacacccctcctcctactccccgcaccac
tccccaaccccatcaccccagacctcccctcggctcagtgtgaccgatgagacctggctg
aacaacaccaaccagtacaccaactccgccattgtggcggccattaatgctctgaccacc
gacaacatggacaacatggatggcatccctgttaagtccaggaagaccaatgtcgacctt
agccccaccatgagccttaaaatggaaccagatgaagaggagcatggcacagcagacctg
tcccctgaagacttttcgaacagacggatgcccttcaaaaaagaaaacttctgtggggaa
ttcttatcagtgccacagaacccatacacctggtgcaaaccaaaatcctacacgagtcct
tcactgcctgcacttgactggcagctgccgtcttgctcgggaccttatgaacttcaggtt
gatgtgcagcccaaatcccatcaccgcgctcattatgaaacagaaggaagccgaggggca
gtgaaggcgtcttctggcggacatcctattgtgcagctccacggttacatggaaagcgag
cccctcaccctccagctgttcatcgggacagcagacgaccgcctgctgcgaccacatgcc
ttctaccaggtccaccgaatcaccggcaagactgtctctacagccagccatgaggtcatg
ctctccaacaccaaggtgctggagatcccactgttacctgaaaacaacatgagagccata
attgactgtgctggtatcctgaaactacggaattcggacattgagctgcgtaaaggcgag
acagacattgggcgaaagaacaccagagtgcggatggtctttcgcgtgcacattactcaa
cccaacggccgcaccatctctctgcaggcatcctccaaccccattgagtgttctcaaaga
tcggcccaggaactgccgcttgtcgagaatcagagcatggacagcttccctgtgacagga
gggaagaagatggtgttaagtggacacaacttccttcctgactcaaaggtcgtctttgtg
gaaaaagccccagatggccaccacatatgggagatggacgcaaaagttgacaaggagtca
atcaagtctacttcattagtggttgaggtccccctgtaccgaaatcagaggataagcagt
cccatccaggtgaatttttatgtctgcaatggaaagaggaagagaagccagtgccagcgc
ttcacctacctgccagctaatgttccaataataaaaacagaacctactgatgactacgag
tctgtagcttctggactaagcacactatccaaatcttactacaaccagcaagtcctgacc
tccatgatgccttcggatcctggctcctgtctggtagccagcttcccttcctaccagcag
agaaacattgcgatgtcaccctcttcacccacctccaactcaagtcctaagctgcatgac
ctctccccttccacctacaccaagtgcaatgccaacactggtcacagtcagctagccagt
ctccagcagcccacagcgggtatccccataatccaagaagtgcccaacaagtctgtggtt
gtgcaccccaactcccctgaccaatcatctctcatcatgctgcagtcccaggtgagtcag
catctcagcagtaactgttctcatggttaccaacaatcactctatcccaacagtccctct
tcttctccggttccctctgccgcccaggagacactttatgtgcagacctacagcccacct
cacccctccatgccgatggggcagcaacctcctcagctgaagaaagctcagcaaaatggg
tctcccactaaccagccggggtcaccaccgctcttgcaggaagagaatagtcagacctca
ttgcctgtcattgtcaagcaggagccccaagagctggaccagatgtacttagatgatgta
aatgaaattataaggaatgatctctccagcacttccatccatggccatgcatag
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