Polyodon spathula (Mississippi paddlefish): 121313338
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Entry
121313338 CDS
T07273
Name
(RefSeq) partitioning defective 6 homolog gamma-like isoform X1
KO
K06093
partitioning defective protein 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
pspa04517
IgSF CAM signaling
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121313338
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121313338
09144 Cellular community - eukaryotes
04530 Tight junction
121313338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121313338
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121313338
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
121313338
NCBI-ProteinID:
XP_041101683
LinkDB
All DBs
Position
3:complement(66919983..66979449)
Genome browser
AA seq
428 aa
AA seq
DB search
MNRSFNKSQTLRYLDFTAVEVKSKYGAEFRRFSLDRFKPGKFEEFYNLILHIHRLSNIEV
MLGYADVHGDLLPINNDDNFCKAVSMANPLLRVFIQKQEEVDYSSFGTNTLTRRKKAVVT
LRNDVNRKRPHISISMPQDFRPVSSIIDVDILPETHRRVRLYRHGSDKPLGFYIRDGTSV
RVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVTGKTLDQVTDMMIANS
HNLIITVKPVNQRNNIIRSSRISGSSGQSTDSGSSTSHHSLPPPSVLNQHLLQNFHPDDM
DSDEEADIVIESSLKQPKKTATPPSKPLSQRSSSRGQLPMPPSPPRPPSSISNASTAIVQ
SHPSNGNNNLSFRLHKELSLQHHSSRGSISKESNGSLHKILNSLRTDPRHSLVLPRGGVE
EDGTVITL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggagttttaataaatctcagaccttgcggtatttggactttactgcagtggaa
gtaaaaagcaagtatggggcagaatttagaagattctccttggatcgattcaaacctggc
aaatttgaagagttctacaatctcattcttcacattcaccggttatccaacattgaagtc
atgctcggctatgctgacgtccacggagacctacttcccattaacaacgatgacaacttc
tgcaaggctgtctccatggccaaccccttgcttagagtcttcatacagaaacaagaggaa
gtcgactacagcagtttcggcaccaacaccctgacaaggcggaagaaggcagtggtgacc
ctccgcaacgatgtcaaccgcaagcggccgcacatcagcatcagcatgccacaggacttc
cggcctgtatcctctatcatcgatgtggacattctgcccgagacccaccgacgggtacgt
ctctaccgccacggctctgacaaacccctgggcttctacatccgggatggcaccagtgtg
cgggtcaccccccacggtctggagaaggtgccgggcatcttcatctcacgcatggtgccg
ggcgggctggcagagagcacggggctcctggctgtcaacgacgaggtgctggaggtcaac
ggcattgaggtgacgggcaagaccttggaccaggtgacggacatgatgatagccaacagc
cataacctcatcatcaccgtgaagcctgtcaaccagcgcaacaacatcatccgcagcagc
cgcatctccggcagctcgggccagtccacagacagtggcagctccaccagccatcacagc
ctgcctcccccttccgtcctcaaccagcaccttcttcagaacttccacccggacgacatg
gacagcgatgaggaggccgatattgtcattgagagcagcctcaagcaacccaagaaaacg
gcaacgcctccttcgaaaccactgtcccaacgttcttcttccagaggccagctcccaatg
ccacccagtcccccacgacctccttcctccatctccaacgcctccaccgctattgtacag
tcccaccccagcaacggcaacaacaacctgagcttcagactgcacaaggagctctctctc
cagcaccacagcagcaggggatccatcagcaaggaaagcaacggcagcctccacaaaatc
ctcaatagcttgagaacagaccccagacacagcctagtcctgcccagaggaggagtagag
gaggacggcaccgttatcacgctttaa
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