Polyodon spathula (Mississippi paddlefish): 121313343
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Entry
121313343 CDS
T07273
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121313343
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
121313343
NCBI-ProteinID:
XP_041101689
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Position
3:complement(67574383..67713961)
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AA seq
832 aa
AA seq
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MKSNQERSNECLPPKKRDFPASNLPSDEKPLVAPASESQRGENLAWLASVASRQNNSGSR
RHSSTGIPAEAQDVALYKPLPTTVDYSSSAIVPRTEATMAMLPTVYPSTLSQPGMPISSL
QNSQLPHALQFISSPYPGPYTSYIPSQLISPTATSTTTPSSQRSQLEAYTAAVMSQAQAS
NTQHHQHQQHHMVRTPGLIAAGTPPPFVQPPNQYVQFAGSPSGIGRAVSSPPTHIPLHLH
SHPAVIPHALALSGNSQLVVHYTDGPLSAASPAKKLQEDGRTQEVLNGEMDKGRRYSLSR
EASLGKPNNGGKGDHHHHHQHQQQQQQQQQQHHHYETRHMVLSAEYNTQETSGIRTSLML
VPSSHASSSTNLEAIREQSPSSVTHIEKTGLGKPNSRSSSYTLSSPHLGSDGLKSTVATL
SPHTVIHTTHSATEQISMGLSAASYYPNAAQQPIIGYIAGSGQQQQQQAISYHTNVPQHL
VIPGSQSLLIPVGGGSGEVEAGPTSVTSSLQFAAVPHTFVTTTVPFGAAETLVSQPSTTY
HAAMVQAQIHLPMVQPMATATPPSVLTPPATSSSLPPYFMKGSIIQLANGELRKVEDLKT
EDFIQSAEVSSDLKIDSSTVERIEGSQNPSFAIIQFAVGEHRAQVSVEVLVEYPFFVFGQ
GWSSCCPEQTTQLFNLPCIKLSVGDVCISLTLKNLKNGSLKKGQPVDPTSSLFLKPPKND
SLYGSRVRYVEHENGVRQRGGGGTVGTIGTQTISENGELKFLEKTGELADCRPLVIKTEA
SSKPTARKRRWSAPESRKVEKWEEEPPLTLPRLSFIPQEVKISIEGQSNLGK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggaacggagcaatgaatgtctgcccccgaaaaagcgtgatttccct
gccagcaacctgccatctgatgagaagccgttggtggccccagccagcgagagccagcgt
ggagagaacctggcatggcttgccagcgtggctagcaggcagaacaactcgggtagcagg
cggcacagcagcacagggatcccagccgaggcacaagacgtagccttgtacaaaccactt
cctaccacggtggactattcctcttcagccatagttcctaggacggaggctaccatggca
atgctccctactgtgtatccttcgactctctcccagccggggatgccaatctcttcgttg
cagaattcccagctcccacatgctttacaattcattagctcgccatacccagggccttac
accagctacatcccctcgcagctcatctctccgaccgcaacctcaaccaccacaccctct
tcccaacgctcccagctcgaggcctatactgccgctgttatgtcacaagcacaggcctcc
aacacccagcaccaccaacaccaacagcaccacatggtcaggacgcctgggttgattgca
gctgggacaccgccaccttttgtacagccgcccaaccagtacgtccagtttgcaggctca
ccttcgggcatcggcagggctgtctcctcccctcccacccacatcccgcttcacctccac
tcccacccagctgtcatccctcatgccctcgcccttagtggaaattcgcaactggtggtc
cattacacagatggacccctttctgctgcttcccctgctaagaagctccaggaagacggg
cggacacaagaagttctaaacggcgagatggataagggcagacgctacagcctgtcccgt
gaggccagcctcggcaagcctaacaacgggggcaagggagaccaccaccatcaccaccaa
caccagcagcaacagcagcaacaacaacaacaacaccaccattacgagacccgtcatatg
gtgctctctgctgaatacaacacacaggaaacctcaggcatacggacgtcactgatgctg
gtccccagtagccatgcctctagcagcacaaatttagaggcaatcagggagcagtcgcct
tcctcggtcacccacatcgagaagaccgggctggggaagcccaattcgagatcctcctca
tacactctttcctccccacatcttggctcagatggcttaaagtcaacagttgccactctt
tctcctcacaccgttatccataccacccacagcgccacggagcaaatctctatgggactg
tctgctgcatcctactatcccaacgctgcccaacagcccatcattggctacattgctggt
agtggccagcaacagcagcagcaggccatcagttaccacaccaacgtgccccagcacttg
gtcatccctggtagccaatctctactgatcccagtgggtggtggcagtggggaggtagaa
gccgggccaactagcgtgacctcatccctgcagtttgcagcagtgcctcacacctttgtc
accactacagtcccctttggggctgcagagaccctagtcagccagccatcgaccacctac
cacgcagccatggtacaggcacagatccacctgcccatggttcagcccatggccactgcc
acacctccaagtgtgctgacacctcctgctacatcttcctccctgcccccttacttcatg
aagggttccatcatccagctggcaaacggggagctgaggaaggtggaggaccttaaaaca
gaggacttcatccagagtgctgaggtcagcagcgacctgaagatagactccagtacagtg
gagcggatcgagggtagccagaaccccagctttgccatcatccagtttgcagtaggagag
cacagagctcaggtcagtgttgaggttttggttgagtaccccttttttgtttttgggcaa
ggctggtcttcatgctgcccagagcaaactactcaactgttcaacctgccctgcatcaag
ttatcagtgggagatgtctgcatctccctaaccctcaagaacctgaaaaatggctctctg
aagaagggccaacctgtggatccgaccagcagcctcttcctgaaaccaccaaagaacgac
agcctatacgggagcagagtcaggtacgtggagcacgagaacggagtcaggcagagagga
ggtggtggcactgtcggcacaatcggcacacagaccatctctgaaaatggagaactgaag
tttcttgaaaagacaggagagctggctgattgcagaccgctggttatcaaaacagaagcc
agcagcaagcccacagccagaaagagaaggtggtcagcgccagagagccgcaaagtggag
aaatgggaagaggagcctcctttgactcttcccaggctctcttttattcctcaggaggtt
aagatttccatcgaaggccaatctaatttaggcaagtga
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