Polyodon spathula (Mississippi paddlefish): 121313372
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Entry
121313372 CDS
T07273
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121313372 (mindy4)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121313372 (mindy4)
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
121313372 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
FOP_dimer
Motif
Other DBs
NCBI-GeneID:
121313372
NCBI-ProteinID:
XP_041101745
LinkDB
All DBs
Position
3:71567535..71606521
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AA seq
727 aa
AA seq
DB search
MNNALVEEVAASLVREYLNRKGLKKTISIMDQELPRTKSSVNNRNDLRRVLKLESLYKMN
KAQEIPLKAMLEIIVKHCMETQNMTNTRTEDCLFQKNAVPKSRSSVSVCDISDEEKGGSI
AVSNHSKTDVYSSSDDVACTSYKFLSYTDSQSNSKISAKCVESSTLSSEGERDSQQRSFS
YAKDSDSLKVDVSSAEINNAFTELQKPRSGRVIRGMMAGPVARSEEESNKKRFLRRSSGS
NVALPLKDEELKNNSTSNPVPSNLATIQLSQSKSISSVIENPSTNELFKRELNRMEKKDT
NAVKSGQTMQKEKGQNTTPDRDISQAYKKKSTASPKADVLQMKLMKLDDINDEEEFCELS
RVPRFSRASRLNVDAHPIDLNLAVDLKNILFGSSLACFNDEWKIQSFPFNDLPDLRYGIV
QKKGGPCGVLASVQACVLQKLLFEETNSSNTFQRLQPSNSHRSKKLALAIADILWRAGDR
KAVVALSSGEKQFIPAGRYKSDGILETIILHTVSSQEDLTLFLEQNIHQFELGPYGCILL
TVSAILSRSTDLVIRDFDVPTNSLIGAHGYCTQELVNLLLTGRAVSNVFNDVIELDSGNG
NSTVLNGITGRSDIGLLSLFEHYNLCKVGSYLKTPKYPIWVICSESHFSVLFSVQKELMN
DWRMERRFDLYYYDELANQQEEIRLTVDTSQNCVADAENDLIPPIEHCIRTKWKGAMVDW
NGTEPLL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgctttagtggaagaggtggctgcatctttagtcagggaatatctcaatcga
aagggtttaaaaaagaccatttctatcatggatcaagaacttcctcgtacaaaatcaagt
gtcaacaacagaaatgatctaagaagagtgttgaaattggagtccctttacaaaatgaat
aaggcccaggaaattccactgaaagcaatgctagagattatagtaaagcactgcatggaa
acccagaacatgactaacactagaacagaagattgtttatttcagaaaaacgcagtgcct
aaatctaggtcttcagttagtgtttgtgacatatctgatgaggagaaaggtgggagtatt
gcagtatcaaaccacagtaaaactgatgtttacagctcgtctgatgatgttgcttgtaca
tcttacaagtttctttcgtacacagattctcaaagtaacagtaaaatatcagcaaagtgt
gtcgaaagcagcaccttatcttcagaaggggagagagacagtcaacaaaggtctttttct
tatgcaaaggacagtgatagtttaaaagtcgatgtgtcctctgcagagattaacaatgca
ttcacagagctccaaaaacccaggtccggtcgcgtaatacgtggcatgatggctggaccg
gttgctcgttcagaagaggaatctaacaaaaagcgttttttgagaaggtcttcagggtca
aatgttgcccttccactgaaagatgaggagctgaagaataattcaacttcaaatccagta
cctagcaatttggctactatacaactttctcaatccaaaagcatatcttctgtcatagag
aacccgtctactaatgagctctttaaaagggaactcaacaggatggagaaaaaagacaca
aatgcagttaaaagtggccaaacgatgcaaaaagagaagggacagaatacaacgccagat
cgagatatatcacaggcttataaaaaaaaatccacagccagtcccaaagcagatgttctt
caaatgaagttaatgaaactagatgatatcaacgatgaggaggagttttgtgaacttagc
agagtacccaggttttccagagcgtcgagactcaatgtagatgcacatcccattgatctt
aaccttgcagtagacctcaaaaacattctttttggctcaagtttggcctgctttaatgat
gagtggaagattcagagtttcccatttaacgatttacctgatttaagatatggcattgtg
cagaagaagggcggaccttgtggagtactggcttctgtccaagcctgtgtgttgcaaaag
ctcctctttgaagagactaacagcagcaatacatttcaacgactgcagccttcaaattct
catagaagcaagaaacttgcattggcaatagctgacatcttgtggcgtgccggagacaga
aaggctgttgttgcactatcctctggagaaaaacaattcattccagcaggaagatataaa
tcagatggaattcttgaaacgataatacttcacacagtgagtagtcaagaagacttaaca
ttgtttttggagcagaatattcaccagtttgagttgggcccttacgggtgtattctactt
acggtttctgctattctatcaagatctacagacctggtcataagagattttgatgtgcct
acaaattcactaattggggctcatggatactgcacacaggaacttgtaaaccttctgctt
actggaagagcagtgtcaaatgtgtttaatgatgtaatagaattagattctggaaatgga
aatagcactgtcttaaatggaattacaggaagaagtgatattggattactttcactcttt
gaacattataatctatgcaaggttggttcatatctgaagactcccaagtacccaatctgg
gtgatctgcagtgaaagccacttcagtgtgctcttctctgtgcaaaaggaattaatgaat
gactggaggatggagagacggtttgacctgtattactatgatgaactagctaatcagcag
gaggaaatccgacttacagttgatacttctcaaaactgtgttgctgatgcagaaaatgac
ctcattcctcctattgaacactgcattaggaccaaatggaaaggtgccatggttgattgg
aatggtacagagccattgctttga
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