Polyodon spathula (Mississippi paddlefish): 121313378
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Entry
121313378 CDS
T07273
Name
(RefSeq) YTH domain-containing family protein 3-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121313378
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121313378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
121313378
NCBI-ProteinID:
XP_041101769
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Position
3:72386350..72408220
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AA seq
614 aa
AA seq
DB search
MSATSVDQQRPKGQGNKVQNGSMHQKDTVNDDDFEPYLGSQTNQSNSYPPMSDPYMPSYY
APSIGFPYSLSEAAWSTAGDPPMPYLTTYGQMSNGEHHFIPDGVFGQPGALGNTPPFLSQ
HGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGRAIADGQAGFGSDTQLSK
VPGLSSIEQGMAGLKLGADMAAVTKTVGSSLGGAVGMNSMAVNSMPPVSSPNPTSWAAIA
RKPAKPQPKLKPKANMSLGSGAAVPPPPIKHNMNIGTWDDKGTIAKPPMAQQVLPPLPLV
HQQLLAQSQPLMHNQLPPQQQHQQLQLQSAHSPQQLPQGHMHQHHNPHQHQHHQPQSGQP
PQLQQPPLQQQPPQQQQPPPPSRWVAPRNRGTSFNQNSAGDNFGLGMGVPVSAPPSSGEV
HPVLEKLKTLNSYNPKDFDWNVKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAA
YRSLGNKGPLYLLFSVNGSGHFCGVAEMKSSVDYNAYAGVWSQDKWKGKFEVKWIFVKDV
PNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQE
EEEAMRRERNRNKQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaccagtgtcgatcagcagagacctaaaggacaagggaataaagtgcaaaac
ggctcaatgcatcaaaaggatacagtaaacgatgatgactttgagccttatctaggcagc
cagacaaatcagagtaacagctacccaccaatgtcggatccctacatgcctagttattat
gctccttcgattggattcccgtactcccttagtgaagcagcctggtccacagcaggagac
ccccctatgccctatttaaccacatatggacagatgagcaatggcgaacatcatttcatc
ccggatggtgtttttggccagccaggggccttgggcaacacgcctcccttcctgagccag
catggattcaacttctttcctggcaatgcagacttttccacctgggggacaagtggttct
cagggacaatcgacacagagctctgcctacagcagcagctatggctatcccccaagttcc
ctaggcagggctattgcagatgggcaggcaggatttggcagtgacacccagctcagcaag
gtgccaggccttagcagcattgagcagggtatggctgggctgaagttgggcgcagacatg
gcggcagtaacaaaaacggtgggctcgtccctgggaggtgcagtaggcatgaacagcatg
gcagtcaacagtatgccccctgtcagctcccccaatcccacctcctgggctgccatcgcc
agaaagcctgcaaaaccccagcccaaactgaagcccaaggcaaacatgagcttgggtagt
ggtgctgctgtccccccacctccgataaagcacaacatgaacattggcacctgggatgat
aaggggaccatagccaagcccccaatggcacaacaggtgctgccacccctgccccttgtg
catcagcagctcctggcacagtcacagcccttgatgcataaccagttgccccctcaacag
cagcatcagcagctgcagttgcagtcagctcattcacctcaacaactgccccaaggacat
atgcatcagcaccataatcctcatcagcaccaacaccatcagccccagtcgggacagcct
ccacaactacagcaacctcccctacaacagcaacctcctcagcagcagcagccaccacct
ccgagtcgatgggtggctcctcgcaaccggggcaccagctttaaccagaatagtgctgga
gataactttggtttggggatgggagtgcctgttagcgctcccccttcttccggggaagtt
cacccagtgctggagaaactgaagaccctcaacagctacaatcccaaagactttgactgg
aacgtcaagaatgggcgtgtgtttatcatcaagagctactctgaggatgatatccaccgt
tccatcaagtattccatctggtgcagcactgagcatggtaacaaacgtctggacgctgcc
tatcgctcgctcggcaataagggccccctctaccttctcttcagtgtcaatggcagtgga
catttctgtggcgtggcagagatgaagtcgtcggtggactataatgcctatgctggcgtg
tggtctcaggacaagtggaagggcaagtttgaggtcaagtggatctttgtcaaggacgtt
cccaacaaccagctgcggcacatccgcttggaaaacaatgacaacaagccagtcaccaac
tccagggacactcaagaagtgcccctagaaaaggctaagcaagtgctaaaaatcatagct
actttcaagcatacgacctcaatctttgatgactttgcacattacgagaagcgtcaggag
gaggaggaagccatgcgcagggagaggaatagaaacaaacagtaa
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