Polyodon spathula (Mississippi paddlefish): 121313385
Help
Entry
121313385 CDS
T07273
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121313385
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121313385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
Ank_2
PHD
PHDvar_NSD
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
121313385
NCBI-ProteinID:
XP_041101796
LinkDB
All DBs
Position
1:7863818..7976767
Genome browser
AA seq
1756 aa
AA seq
DB search
MELSCREVPLYGQVTAYAVLEATALLPEEAEFYLVYEGSSQDHITEAQIHCDGNTSTLHF
VVPGHNQLENVSVTACIYMTGHPIAVLARSSITYIPDKAHDLARFLVDNSHCLTSSSHLT
ILKRFGLSGEARDTVDDKTTLTLAHLEFPYSWNVLGSQAGEELGPRESLLHLAVRLGLFN
LSQFLLCQPGGLIALSLPNEDGATPEQLAIQTGNQGLVELLRNPPNPLVTALAGISEIQA
DSGRQLKFFHLSEALTLTVTHGTEWTLEAHIQLLRKHLKDNNFLTEITSLKINGPDGRPQ
MEYTEGTADKGSLKDLCGGTHTLLDNVFEEQLVLSMDGEDVDHAQLNTEKGHSSQEAFQK
AGAHPTFNAAARLSAMLSRNDEIYANAMLVDHVDDMDIKYSTDGTITESTSTDSSSQDLS
WGIRSDAGSLNAGPPASNNMFECSNDKMDTTSNTADTEQLRTISAANLALARLNQTQWPL
GFNKGGGAPDSKMSEQSPSLDGLDVDSEEEDSSDKSPPSNLSSAAPLQVSSGDEQDSFNT
SPELSANRTRSSSAYITANSKEPVDSGVRLRSYSYSSPKITLARPRGIRDSGNSHLSEDG
VFNSGRSLLQALSLSKSVSLLHPGKQRAYSLPEQPKEKRIEEEEWDKYIIPSKCESEKFK
VSRTISFLKSRMSSTRNKNKGKNKDKEGKDRLVNGHQFITGSCSGLTLCLVCDKPAIGKE
LLQCFNCAISVHKGCRDSTTPCLKQKLDKYTVAAKNKPASSPQSSAVREISCPPDPAING
TSSLPVGTSWDGRRDPSHQGLHISKSMSAVSMERLNEEMDSDGDSASWRGQSQSEETLQL
MGTSPSTDSYAVDDTVDAPLRTDLGADSAEYEAESWSLAVDQKFCSKQEKHVIKRQDVIY
ELMQTEMHHIQTLLIMSEVFRKGMREEVQLDPCTVARIFPCLDELLHMHSSFFRAMKGRQ
HDCAQEDSDRNFLIHRIGDILVHQFSEENAVKMKQVYGEFCSRHTEAVNLFKELQQQNKK
FQAFIKQQSNNFLARRREIPECILLVTQRITKYPVLLERILQYSKEGKEEHADLTRALGL
IKDIIATVDLRVSEYEKEQKLLEILSRVENKTLAKLKNGHSFRKQDLRSRDRTLQHEGLV
YWKTATGRLKDIMALLLTDVLIFLQEKDQKYIFAAVDQKPPVISLQKLIVREVANEERGM
FLISASSAGPEMYEIHTASKEERNSWMRHIREAVESCPEEEERTSETEEDRRIAEARAQK
ILKLQESLSNQDQQICNSLEDKLRIYAELTGMSIHQESMLEPHLLIRPDPEDVPQAAMLL
TAALREAEKLTATLTSQPCGSSSQSQESLGEPSSPMKLKAFESFSSIPESPTESDYLNTQ
SSSSVSLSSDSEIREGEWSGAYSYISQSLSELKRTDSNNTSLKVAQSVQSLTQLLYSLQA
AVTIQDSCFEVQKLLLLESERMPRLPGSRGNLLQEQEKQRNVEKQREELAGVQRLKSQLR
LEQQRWERECDHRQRQHREQESRLDQRERECHLQAEQLQREREELESQLQEYQHNLERLR
EGQRLVEKEREKLDSWKHSQQNSLPIMFPVDSNQVIRHSRSGSFEGNGSVFVNEAALQMS
LINQHRSSSFVYPDTSSAHNSLNSLIAQTSENQTNQRTDFPYYPLASSSQNRRPQSTQQQ
IPASVVWGHRDRANNETNTHCSNTDKASLGQGQSASSPYQGYSQSPPLHLLIEPQNYISL
QPENGQDGSEENIVYL
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagctgcagagaagtgcccctctatgggcaggtgacagcttacgcagtgttg
gaggcaacggctcttctgcctgaggaggctgagttctatttggtgtatgagggttccagc
caggaccacatcacagaggcacagatacattgcgatggaaacacaagcactcttcatttt
gttgttccaggtcataaccagttggaaaacgtgtctgttactgcctgcatttatatgacg
ggtcaccccatcgctgtcctggccaggagctctatcacgtacattccggataaagcacat
gacctagcccgattcctggtggataactctcactgcctaacctccagcagccacctaacc
atactgaagagatttggactgagtggagaagccagagacactgtcgatgacaagaccacg
ctaaccttggctcacctggagttcccctattcatggaatgtcctgggaagccaagctgga
gaagagctagggcccagagagtccttgcttcatctggcagtgcgattaggcctgtttaat
ctttctcagtttctgctgtgccagcctggcggcctgatagctttgtctttacctaacgag
gatggagccactccagagcagctggcaattcagactgggaaccaagggcttgtggagctg
ctgagaaatccaccgaatcccctggtcactgccttggctggtatttctgagatccaggct
gacagtggcaggcagctgaagttctttcatttatcggaggccttgacactcaccgtcaca
catggcacagagtggacactggaggcacacattcagctcctgaggaagcatttaaaggac
aacaacttcctaacagagattacatcccttaaaataaacggaccggatggcaggccacaa
atggaatatactgaaggcactgctgacaaaggctctttgaaagatctctgtgggggaacc
catactctattagataatgtttttgaagaacagttggtgctgtcgatggatggagaggat
gtggaccatgcacagttaaatacagagaaaggccattcctcacaagaggctttccagaaa
gccggcgctcatcccaccttcaacgcggctgccagactctccgccatgctgagcaggaac
gacgagatctacgcaaacgccatgcttgtggaccatgttgatgacatggatataaagtac
agcactgacgggaccatcactgaaagcacatcaacagacagctctagtcaggatctgagt
tggggcattcgctccgacgctggctccctgaatgcaggcccacctgcctctaacaacatg
tttgaatgcagcaatgataaaatggacaccacaagcaatacagccgacacagagcagttg
cgcacaatctcagctgccaatctggctcttgcaagactgaatcagacacagtggcccctg
gggtttaataaaggaggaggtgcaccagatagcaagatgagcgaacagagccccagtctg
gatggtctcgatgtggacagtgaagaagaggacagttcggacaagtctcctccgtccaac
ctttcatctgcagcccctctgcaagtgagcagcggtgatgaacaggactccttcaacacg
tctccagagctgtctgctaacagaacgagatccagttctgcatacatcactgctaactca
aaggaaccagtggattctggagtccggctgcgttcttattcctattcttcccccaagatt
accctggccagacctcgcggcatacgggactcagggaactcccatctgagtgaagatggt
gtgttcaacagcggccggtcccttctgcaggctctctctctgtctaaatcagtgtctctg
ctccaccctggtaagcagcgtgcttacagcttgccagagcagcccaaagagaaaagaatt
gaagaagaggagtgggataaatacattatcccttccaaatgtgaatcggagaaattcaaa
gttagtcgcactatcagcttcttaaaaagcagaatgtctagcacaaggaacaagaacaag
ggaaaaaataaggacaaagaaggaaaggacaggttggtcaatggacaccagttcataacg
ggatcgtgctcagggctgacgttgtgtttggtctgtgacaagcctgccattgggaaagag
ctcttgcagtgtttcaactgtgcgatcagtgtccataaaggctgcagagattctacgaca
ccatgtctcaagcagaaactggataaatacacagtggcagccaagaacaagccagcatct
tccccacagtcttcagcagtcagagaaatctcgtgtccacctgacccagcgatcaacgga
acttcatccctccctgtggggacatcgtgggacgggaggcgagacccgtcccaccagggc
ctccacatctccaagagcatgtcagctgtcagcatggagcggctgaatgaggagatggat
tcagatggggacagtgccagctggaggggccaatcccagtctgaagagacacttcagttg
atggggacttcaccctccactgattcgtatgcagtagatgacaccgttgatgcccccttg
cgaactgacctgggtgcagattcagcggagtacgaagcagagtcctggagtctggccgta
gaccagaagttctgcagcaagcaggagaaacatgtgattaaaaggcaggacgttatttat
gaactgatgcaaacagaaatgcaccacatccagactctgctgatcatgtcggaggtcttc
aggaaaggcatgagggaggaggtgcagctggatccctgcactgtggccaggatcttcccc
tgcctggacgagctgctgcacatgcacagcagcttcttcagggccatgaaaggacgacag
catgactgcgcccaggaggacagtgacaggaacttcctcatccaccgcatcggggacatc
ctggtgcaccaattttcggaagaaaatgcagtgaagatgaaacaagtgtatggagaattt
tgcagtcgtcacactgaagcggttaacctcttcaaagagctgcaacagcaaaataagaaa
ttccaagcctttatcaaacaacaaagtaacaacttcctggcacggcgtcgagagatccca
gagtgcatcctgctggtcacacagcgcatcaccaagtacccggtcctgctggagcggatc
ttgcagtactccaaggaaggcaaagaggagcatgcagacctgaccagagcactgggactg
atcaaggatatcatagcgacagtggacctgagggtcagcgagtacgagaaggagcagaag
ctgctggagatcctgagcagggtcgagaacaagacgcttgccaagctgaagaatggtcac
tctttccggaagcaggacctgaggagcagggaccgcactctgcagcatgaggggctggtc
tactggaaaacagccaccgggagactgaaagatatcatggctctacttctgactgacgtt
ctaatattcctgcaggagaaagaccaaaaatacatctttgctgctgtggatcagaaacct
ccagttatctctctgcagaagctaatagtgagagaagtagccaacgaggagcgagggatg
tttctgatcagcgcttcatctgcagggccagagatgtatgagattcacacggcttccaaa
gaggaacgcaacagctggatgagacacattcgagaagcagtggagagctgtccagaggag
gaggagcggacgagtgagaccgaggaggacaggcggatcgctgaggccagggcacagaag
atccttaaactccaggagagtctcagcaaccaggaccagcagatctgcaacagtttggaa
gacaagctgaggatctatgcagagctcacgggcatgagcatccaccaggagtccatgctg
gagccacacttactgatcagaccagacccagaggacgtgccacaggctgccatgctttta
acagcagcactcagagaggctgaaaaactcactgctactctgacatcacagccctgtggt
tccagtagccaatcacaggagagtcttggtgagcccagttcaccaatgaaactcaaagcc
tttgaaagtttcagcagtattcctgaatctccaactgagtctgattacttgaacacacag
agttctagttctgtatccctgtcgtcagactctgaaataagggaaggggaatggtctgga
gcttactcatacatctcacaatccctcagcgaattgaagagaaccgactccaacaatacc
agcctcaaggtggctcagagtgtgcagagcttgacacaactcctgtacagcttgcaggcc
gccgtgacgattcaggacagctgcttcgaggtccagaagctgctcctcctggagagcgag
cgcatgccccgcctccctggttcccgtggcaacctcctccaagagcaggagaagcagcgc
aatgtggagaagcagcgtgaggagctggctggtgtgcagcggctgaagagccagctgaga
ctggagcagcagcgctgggagcgtgagtgcgaccaccggcagcggcagcatagggagcag
gagagcaggctggaccagcgtgagcgagagtgccatcttcaggccgagcagctgcagcgc
gagcgtgaggagcttgagagccagctgcaggagtaccagcacaacctggagcggctgcgc
gaaggccagaggctggtggagaaggagagggagaagctggacagctggaagcacagccaa
cagaacagcctgcccattatgtttccagtggacagcaaccaggtgatccgtcactctcgc
tcaggaagctttgaagggaacggttctgtttttgtgaatgaggctgccttgcagatgtct
cttatcaaccaacaccgctccagttcctttgtgtacccggacacctccagcgcacacaac
agtttaaactctctgattgcacagactagcgagaaccagaccaatcagaggaccgacttt
ccgtactacccactggcctcctccagtcagaaccggaggccgcagagcacccagcagcag
attccagccagcgttgtctggggacacagagacagagccaataacgaaaccaacacacac
tgttctaacacggacaaagcttctcttgggcaaggccaaagcgcatcaagcccatatcaa
ggatattcccagtccccgccactgcatctcctgattgaaccccagaactatatctctctg
cagcctgagaatggacaggatgggagtgaagagaacattgtctacctctga
DBGET
integrated database retrieval system
