Polyodon spathula (Mississippi paddlefish): 121313428
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Entry
121313428 CDS
T07273
Name
(RefSeq) zinc finger protein SNAI2
KO
K05706
snail 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121313428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121313428
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
121313428
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-Di19
zf-C2HC_2
Zn_SUZ12
Zf-C2H2_ZNF451_6th
Zf-C2H2_ZNF451_1st
zf-met
zf-C2HE
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
121313428
NCBI-ProteinID:
XP_041101887
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All DBs
Position
3:complement(76946761..76949884)
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AA seq
268 aa
AA seq
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MPRSFLVKKHFNSAKKPNYSELDNHTVFISPYLYKGYPVPVIPQPDILSSVAYNPITVWT
TSSLPLSPLPDDLSPISGYPSSLGRISPPPASDTSSKDHSGSESPISDEDERMHTKMSDP
HSVEAEKFQCSLCSKSYSTYSGLLKHKQLHCDAQTRKSFSCKYCEKEYVSLGALKMHIRT
HTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHCSRAFADRSNLRAHLQTHSDVKK
YQCKNCSKTFSRMSLLHKHEESGCCVVH
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgccacgttcgttccttgttaagaaacattttaactcagctaagaagccaaattacagt
gaactggacaaccacacagtcttcatttcaccgtatttgtacaagggttaccctgtgcct
gttattccacaaccagatatcctgagttcagtagcatacaaccctatcacagtatggact
actagcagcctcccgttatctccattacctgacgacctgtcgccaatctctggatacccc
tcgtctcttggacggatcagcccgcctcccgcatctgacacttcttcaaaagatcacagc
ggctctgagagtcccataagcgacgaggatgagagaatgcacaccaaaatgtcagaccca
cattctgtggaagcggagaagtttcaatgtagcttgtgcagcaagtcctactctacatac
tccggactgctcaaacacaagcagttgcactgtgacgcccagacaaggaaatcttttagc
tgtaaatactgcgagaaggagtatgtgagcctgggagccctaaagatgcacatcaggacc
cacactttgccttgtgtctgcaaaatatgcggcaaagctttctccagaccctggttgctg
cagggacacatcagaacacatactggagagaagcctttctcttgcccacattgcagcaga
gcatttgcagacagatccaacctcagggctcatctacagacccattctgatgtgaaaaaa
tatcaatgcaagaactgctccaaaaccttctccaggatgtcgcttctgcacaaacacgag
gaatctggttgctgtgtagtacactga
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