Polyodon spathula (Mississippi paddlefish): 121313432
Help
Entry
121313432 CDS
T07273
Name
(RefSeq) suppression of tumorigenicity 18 protein-like
KO
K24386
suppression of tumorigenicity 18 protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121313432
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
121313432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2HC
MYT1
FapA
DUF3450
YabA
DUF720
DUF7310
DUF16
Motif
Other DBs
NCBI-GeneID:
121313432
NCBI-ProteinID:
XP_041101891
LinkDB
All DBs
Position
3:complement(77540904..77639670)
Genome browser
AA seq
1153 aa
AA seq
DB search
MGKGSLKRFRNKSCSKYKESRVVQKRRADTKVATKKNFTKTTVKAADPTVVAKPAVKSES
SLRRSRNLEKPAEPQQEGEQEEDLCSSTSESSGKENEFHSCILKQSQTCSCSEKLELSGT
TCKSPCMQTKMEAESEEKRLQKCKRSKVPVDCIAQALSAYGSMARKRSAQEVVSGAPVNK
RKSLLMKPRHYNPSNDCEEENKDFTESEGKEESRSTDSLAGMNLETDKASCKNSYHNAEE
KTLLKQEPEDSSEHAAFESTLNDSGIHSTEADSEGDVPDQAKEENNVASEMESVPYCSLV
HNESHSETVDSEWESLSKFVKVNGVNGNHTTESLGKTSDAEKYDDDMDSGACQHLDVQIK
SLQVETLSSRKDLSESEDKVDVLGEDDGWSTGVSEHTLNFGRAKGNVSLLEQAIALQSEQ
RQVLHNAYREMDQFLLEQMSGERRHSRLGDIDGRHNYNNCKESPSSDKKETKCPTPGCDG
TGHVTGLYPHHRSLSGCPHKVRVPPEILAMHENVLKCPTPGCTGRGHINSNRSTHRSLSG
CPIAAAGKMPKSQEDSPKSEQNSDWVSRPPGLPRQFEVPQYSYNFAQPVTALQANLANKL
DKYSTIRFDYASFDAQVFGKRTASPVELDQDAARFSESSPQFSSSLTSSSRLPASQVQSP
CHPSTYSYSHAGDAHAAAEATAILNLSPRYRGNPDSSSAMPQTPTTKDVFIEVDENGTLD
LSMKRNRVHEKVPPVLPLETAPSTPESSPSKTGVILVTPAFYQALCQQEGWDTPVNYSKD
HKLIDKEKEELDNVSDILEERKYPGDVTIPSQMSKPLSRDNKKELMSCPTPGCDGSGHVT
GNYASHRSVSGCPLADKTLKSIMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRAK
KGGLKLTPSKEDQDKEDQDLKCPVIGCDGQGHISGKYTSHRSASGCPVAVKRQKESSNHG
SAFSWNVSKQELPHCPLPGCNGLGHANNVFVTHRSLSGCPLNAQTIKKFKHSGEEMMTIK
LKARGIENEEDMKQLDDEIKELNESNLKIEADMQKLQTQISSMEYNLKSIEEENKLIEQQ
NDSLLKELARLSQALIHSLSDIQLPQMGPISEQNFEAYVNTLTDIYNNSEHDYSPECKAL
LESIKQAVKGLHV
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaggaagcctgaaaaggttcagaaataagtcttgttcaaagtataaggaatcc
agggtcgtccagaaaaggagagctgacaccaaagttgcaactaagaagaatttcaccaag
acaacagtgaaggcagcagacccaacagttgtggccaagccagctgttaaatcagaaagc
agcttaagaagatcaagaaacctggagaaacctgcagagccacagcaggaaggggaacag
gaggaagacctttgcagcagcactagtgagtcctctgggaaagagaatgaatttcactcc
tgcatactgaagcagtcacagacttgcagttgtagtgagaagttagaactctctggaaca
acctgtaaatcaccctgtatgcaaacaaagatggaagcagaaagtgaagaaaagaggctt
caaaaatgcaaaagaagcaaggttcctgtagactgtatagcacaggctctcagtgcctat
ggctccatggcaagaaagagaagtgcccaggaagttgtaagtggagccccagttaacaag
aggaagtctcttctgatgaaaccacgtcattacaatcccagcaatgactgtgaggaggag
aataaggacttcacagaatcagagggcaaagaagagtcaaggagcactgactctctagca
ggaatgaatttggagacagacaaggcctcatgcaaaaacagctaccacaatgcagaggaa
aagacactactgaaacaagaacctgaggattcatctgagcatgctgcctttgaaagcacc
ctgaatgacagtggcatccactccacagaagcagacagtgaaggtgatgtgccagaccaa
gcaaaagaggaaaacaatgttgcttcagagatggagagtgtgccttattgctctttagtg
cacaatgaaagccactctgaaactgtggacagtgagtgggagagcttgtccaagtttgtg
aaggtgaatggcgtaaacggtaatcacacaacagagtcactggggaagacaagtgatgca
gagaagtatgatgatgacatggattcaggtgcttgccaacacctggatgtgcaaataaag
agtttgcaggttgagaccctgagctctaggaaggacctaagtgaaagtgaagacaaggtt
gatgttcttggtgaagatgatggctggtcaacaggggtttcagagcacacccttaatttc
ggcagggctaaagggaatgtgagtctcctggaacaggccatagcccttcagtctgagcag
cggcaggtccttcacaatgcttacagggaaatggaccagttcttactggaacaaatgagt
ggggaaaggagacacagcagactcggagacattgatggcagacacaactataacaattgc
aaagaatctccaagttcagataagaaggaaacaaagtgccctacaccaggttgtgatggc
actggtcatgtgacaggactctacccacatcacagaagtctttctggatgccctcataag
gtccgagtgccaccagagatccttgccatgcatgagaatgtactgaaatgtccaacgcca
ggatgcacaggaagggggcatattaatagtaaccgtagcacacacaggagtctttctggt
tgtcctattgctgctgcgggaaaaatgcctaaatcccaggaagatagtccaaaaagtgaa
caaaattctgactgggtgtccagacctccaggcttgccaagacagtttgaggttcctcaa
tacagctacaattttgcacagcctgtcactgctctccaagccaacctggcaaacaagttg
gacaaatacagcacaatccgctttgattatgctagcttcgatgcacaggtctttggtaaa
cgcactgcttccccagttgaactggaccaggatgctgcacgcttttctgaatcgtcccca
cagttttcaagctcactgacatccagcagcagactaccagcctcccaggtgcagagcccc
tgccatcccagcacctacagctacagccatgctggagatgcccatgctgctgctgaggcc
actgccattctcaacctgtccccccgatacagagggaacccagacagcagctctgccatg
ccgcagactcccactacaaaggatgtattcatcgaggttgatgaaaatggcactctggac
ctgagcatgaaaaggaaccgtgttcatgagaaggtccctccagttctacctttggaaact
gcaccatctacacctgagtcttctccttcaaaaactggtgtcatcctggtaacacctgcc
ttctaccaggctctttgtcaacaggaaggatgggacactcctgttaactacagcaaagat
cacaaattaatagacaaagagaaagaagaactagataatgtatctgacattctggaggaa
agaaaatatccaggtgatgtaactattccgagtcagatgtccaaacctctttccagagac
aataaaaaggagctgatgagctgtccaactccgggatgtgatggaagtggacatgtgact
ggaaattatgcttctcatcgcagtgtttctggctgtccattggctgacaagactctaaaa
tctatcatggctgccaattctcaggaactcaagtgtccaacacctggttgtgatggttca
ggtcatgtgactggaaattatgcttcacacagaagcttatctggctgtccaagggccaag
aagggaggcctgaaactaacacccagtaaggaagaccaagacaaggaagaccaagatctt
aaatgtccagtaattggttgtgatggccagggtcacatatcaggcaaatatacatcccac
cgcagtgcgtcaggctgccctgtagctgtcaagagacagaaggagagctctaatcatggg
tctgcattctcctggaatgtcagcaaacaagaactgccacactgtcctttgccaggctgt
aatggattaggtcatgctaataatgtgtttgtcactcatagaagtttgtctggatgtcct
ttgaatgcccagacgatcaagaagtttaagcattcaggagaagagatgatgactattaaa
cttaaagcacgtggtatagaaaatgaagaagacatgaaacaattagatgacgagatcaag
gaattgaatgaatccaatcttaaaatagaggcagacatgcagaaactccagactcagata
tcttcaatggagtataatttaaaatcaattgaagaggaaaacaagctgattgagcagcag
aatgacagcctgctgaaggagttagctcgtctgagtcaggctcttatccacagtctttct
gatatacaactccctcaaatggggccaatcagcgaacagaattttgaagcctatgtgaac
actctgacagatatatataacaattcggagcatgattactcgcctgaatgtaaagctctt
cttgaaagcattaaacaagctgtaaaaggccttcatgtgtaa
DBGET
integrated database retrieval system
