KEGG   Polyodon spathula (Mississippi paddlefish): 121313462
Entry
121313462         CDS       T07273                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121313462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121313462
Spliceosome [BR:pspa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121313462
 Complex B
    121313462
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 121313462
NCBI-ProteinID: XP_041101959
LinkDB
Position
3:complement(79863668..79878261)
AA seq 535 aa
MAVSVNVGGEALMMKNGQSTVPKLGLPLLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTVRQAFA
HFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARSFNRIYVASVHPDLSDEDIKSVFEAFGKIKSCMLVRDPTTGKHKGYG
FIEYEKSQSSQDAVSSMNRFDLGGQLLCVGKAVTPANALLAPMTPGGLPPAAAVAAAAAT
AKITAQEAVAGTSALNALTTPTLTLGQTLGQTFGQSLGQPLGALPQAMMAAQALGVFSGV
NQMQPLLPVIPQVGLVNPVLSTPPALAAAAKAKKEKEEEVGADGERTEMLSEQEHMSISG
SSARHMVMQKLMRKQESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQG
EEEDAEVIVKIFVEFSTATEMDKGIEALNGRWFGGRKVIAEVYDEERFNNSDLSA
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggcggtatcagtgaatgtgggtggtgaagctctaatgatgaagaatggacagagcaca
gtgccaaagcttggcctccctctgcttactccggagcagcaggaggcgctacagaaggca
aagaagtatgcaatggagcagagcatcaagagtgtgctggtgaagcagaccattgctcac
cagcagcagcaactaactaacctccagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcgatggcagcccagcggcagcgtgcgctagccatcatgtgtcga
gtttacgtgggctcaatttactatgagttgggggaggacactgtccgacaagcttttgct
cattttggacccatcaaaagcatagatatgtcctgggactcggtcactatgaaacacaag
ggatttgcctttgtcgagtatgaagtcccagaggcagcacagcttgccctggaacagatg
aactcggtcatgctgggaggaagaaacatcaaggtgggcaggccaagtaatattggacag
gctcagcccatcattgaccagctagcagaagaggcaaggtcctttaaccggatctacgtt
gcatccgtacatccagacctgtctgatgaggacatcaagagtgtctttgaggcttttggg
aaaatcaaatcctgcatgctagtcagagaccccactacaggcaaacacaaaggttatggc
tttattgaatatgaaaagtctcagtcgtctcaggatgctgtatcttccatgaaccgtttt
gatctgggaggtcagttactgtgcgtcggtaaagcggtcactccagccaatgcacttctg
gcccccatgacgcctggaggcttaccgcctgctgcagcagtggcagcggcagcagcgaca
gccaagatcacagcgcaggaagcagtagctggaacctcggcactgaatgcgctcacgact
ccaacactgacgctgggacagacattgggacaaacatttggacagtcattgggacagccg
ctgggggctctaccccaggcaatgatggcagcacaagcacttggcgtcttctcaggtgtg
aatcaaatgcagccactccttccagtgataccacaggttgggttagtgaacccggtcctg
tccacccctccagcactagcggccgccgcaaaggccaagaaggagaaagaggaagaggtg
ggagcggatggggagcgcacagagatgctgagtgaacaggagcacatgagcatctcgggc
agtagtgccagacacatggtcatgcagaaactgatgagaaaacaggagtcaactgtgatg
gtgcttcggaacatggttggtcccgaggacattgatgatgatcttgagggcgaggtgaca
gaggagtgtgggaagttcggagcagtgaaccgtgtgatcatctaccaggagaagcagggg
gaggaggaggatgctgaggtgatcgtcaagatatttgtggagttttcaacggcaaccgag
atggacaaaggcatcgaggcgctgaatgggcgctggtttggaggcaggaaagtcattgct
gaggtgtacgacgaggagcgcttcaacaacagcgacctgtccgcttaa

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