Polyodon spathula (Mississippi paddlefish): 121313481
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Entry
121313481 CDS
T07273
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04382
Cornified envelope formation
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121313481
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121313481
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121313481
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Major cadherins
121313481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
PKD_4
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
121313481
NCBI-ProteinID:
XP_041102019
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All DBs
Position
3:complement(81020935..81032267)
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AA seq
1132 aa
AA seq
DB search
MAGISFPGIGLLLLFVLMVVESHVKAEWIIPPVKVRENEEHTKNPIAKIRSDVKDVVKYE
IVGEGADQKPYHLFIINPDNGEVSITSMVDREEKDIYKLKGRAYNAAGKQVENDIDLLVK
IEDVNDNSPKFTQNFFSGSVYELSERDTFVMQINATDADEPNSRNSLIAYEILEQSPADM
FYVERNTGRIMVAESTLDRETQSKYTLTVQAKDLDGELGGLATTVQLDIKIKDVNDNAPA
LEFEPYEGSVVENTKGVEVMRMKALDADEEFSENWLAEFEIESGNEGGYFRIETDVKTNE
GILILQKEVDYEELQSIILTGVVRNKAAFHISKGSSSFSSILKYFEVKIKVKNEPEGLKF
TPKVKAIYISEATSKVDLTKVIAKYPAIDADTGKIAEKVKYVKKYDPHNWLIIDLKTGDI
KLAKVPDRESKFLVNGTYTAEILAITDDLPAKTATGTIAIQVEDFNDHCPVLTSTSTDMC
SNEKSVVVTAVDEDADPNSVPFKYKIFDEPKGTAQNWKVEHLNGTSMILKPMETFWPGQY
SVTLLIYDQQGKSCSDKQVLNIAVCTCENTRACVPVTDRLQSTGARLGPAAIGLMSLALL
LLLLVPLLLLFCSCGAGAAGGFVPITDGSAGHLISYDTEKIGEDKAVPPLVPSMVKDING
QIWWRRPVTAEQWHAKGWSVDAFEGVALPEAYLEQYYVEKTKYVLMEGHLQKDAMLVYDY
EGQESPVGSTGSCSFTEEDLDQSFLNELGPKFKTLAEICRGTEMTSGVSVEQPGVAVQHT
TVSTNPVITNNCVVTNKTVEVTSPVPAPQVQKNVVVTENVSPPQPTVYLQKNVVVSDPGF
VQQPVYYATNPIIQTTRYIVEPQIQRNVVIERSSVPGLQGHLLMSDVPSTQNVMVTQKRL
VHGSGNQGGMMVGLDQGTLRTSEIPNSQHVLLLENRGFDQGSMHFSEPVSHNVVLTEKRV
VSGRNVQGDMMGYELGSLHRNVMPGSQNVMVTEKTVVSDSSMQGGKMGFGQGTLRMSEMP
KSQNVVLLENKGFDQGSMRLSEPVSHNVVSGHNVQGDMMGYELGSLHRNVMPGSQNVTVT
EKTVVSESSMQGGKVGFGQGTLRMSEMPNAQHVTVTEKRVVSGSSVQVGLMG
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggctggaatttcatttccagggattggtttgctgttactgtttgtattaatggttgtg
gaaagtcatgtgaaagcagaatggattattccaccagttaaagttagagaaaatgaagag
cataccaaaaatccaattgccaaaattcgatctgatgtaaaagatgtagttaaatacgaa
attgttggtgaaggagctgatcagaaaccttatcacttatttattattaatccagacaat
ggtgaggttagcatcacatcaatggttgacagagaagaaaaggacatctacaaactgaaa
ggacgtgcttataacgctgcaggaaaacaagtggaaaatgatattgacctgctggttaaa
attgaagatgttaatgataacagtcccaagttcacacagaattttttttctgggagcgtt
tatgaactgagtgagagagatacttttgtaatgcaaataaatgcaactgacgcggatgag
ccaaactcaagaaattcactcattgcttacgaaatacttgaacagagccctgcagacatg
ttttatgttgaaaggaacacgggcagaattatggtagcggagtctacccttgacagagag
acacagtcaaagtatactcttacggtacaagccaaagatttggatggagaattgggtggt
ttggctaccacagtacaacttgacattaaaattaaagatgtcaatgacaatgctccagca
ctggagtttgagccttatgaaggtagtgttgttgaaaatacaaaaggcgtggaagtaatg
agaatgaaagcccttgatgcagatgaagaattttcagagaactggcttgctgaattcgaa
attgaatcgggcaatgaagggggttacttcaggattgagactgatgtaaagactaatgaa
gggattttgattctacaaaaggaagttgactatgaagaattacagagcattatcctcact
ggtgttgtcagaaacaaagcagctttccatatttcaaagggatcctcatcattttcttca
attctaaaatattttgaagttaaaatcaaagtgaaaaatgagcctgaaggtcttaagttt
accccaaaggtaaaggcaatttacatttctgaggcgacgtcaaaagttgatcttacaaaa
gtaattgcaaagtatccagccattgatgcagacactggaaaaattgctgaaaaagtcaag
tatgtaaagaaatatgatcctcataattggctgataattgatctgaagactggagatatt
aaacttgcaaaagtaccagaccgtgaatcaaaatttttggttaatggcacatatactgca
gaaatattggccattacagatgatttacctgcaaaaactgctactggtactattgcaatc
caggtagaagacttcaatgatcactgtccagttcttacaagtacctctacagacatgtgt
tctaatgagaaatcggtggtagtcacagctgtagatgaagacgcggatcccaatagtgtc
cccttcaaatacaagatctttgatgaacctaagggtacagcgcagaactggaaagtcgaa
catctcaatggaactagcatgatactcaaacccatggaaaccttttggcctggtcagtac
agtgtaacccttttaatatatgatcagcaggggaaatcctgtagtgacaagcaggttcta
aatattgccgtctgcacctgtgaaaacaccagggcctgtgtaccagtcaccgacagactt
cagtcaactggagctagacttggacctgcggctattggtcttatgagtctagcactctta
ctgctgctacttgtgcctcttctgctgctattttgttcatgtggggctggagcggcaggc
ggttttgtcccaattactgatggttcagcaggacatttgatttcatatgacacggaaaaa
ataggtgaagataaggcagttccacctcttgtaccatcaatggtcaaggacatcaatgga
caaatttggtggcgaagaccagtaacagcagaacagtggcacgccaagggatggagtgta
gatgcctttgagggtgtagctctacctgaagcttacttggaacagtactatgtggagaaa
actaaatatgttttaatggaaggtcatttacaaaaagatgccatgttggtgtatgattat
gaaggccaggagtcacctgtgggttcgacaggatcttgtagctttactgaagaagatcta
gaccaaagcttcctaaatgaactaggaccaaagtttaagactcttgctgaaatctgcagg
ggcacagagatgacttcaggagtttcagttgagcagcctggtgttgctgttcagcacacc
accgtgtccactaacccagtcatcaccaataattgtgtggtgaccaacaaaaccgttgag
gtgaccagcccagttccagcaccccaggtccaaaagaatgtggttgtcacagaaaacgtg
tctcctcctcagccaaccgtgtatctccagaaaaatgtggttgtttctgaccctggcttc
gttcaacagcctgtatactatgccactaacccaatcattcagaccactcgatacattgtt
gagccacagatccaaaggaatgtcgtgatagaaaggtcttctgtccctggcttgcaaggc
caccttctaatgagtgacgttccaagcactcagaatgtgatggtgacccagaagagattg
gtgcatggctcgggtaatcagggtggcatgatggtggggttagatcagggtactctgcgc
acgagtgaaataccaaactcacagcatgtgttactgctggaaaatagaggttttgatcag
ggaagtatgcacttcagtgaacctgtttctcataatgtggtgttgacggagaagagagtg
gtgtctggacgtaatgtgcagggtgacatgatggggtatgaactaggcagcttgcacagg
aatgtaatgcctggttcacagaatgtaatggtaacagagaagaccgtggtatctgattcc
agtatgcagggtggaaagatgggttttggtcagggtactctgcgcatgagtgaaatgcca
aaatcacagaatgtggtgctgttagaaaataaaggttttgatcagggaagcatgcgcttg
agtgaacctgtctctcataatgtggtgtctggacataatgtgcagggtgacatgatgggg
tatgaactaggcagcttgcacaggaatgtgatgcctggttcacagaatgtaacagtaaca
gagaagaccgtggtatctgagtccagtatgcagggtggaaaggtggggtttggtcagggt
actctgcgcatgagtgaaatgccaaacgcacagcatgtaacagtgacagagaagagagtg
gtatctggaagtagtgtgcaggttgggttaatgggatga
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