Polyodon spathula (Mississippi paddlefish): 121313487
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Entry
121313487 CDS
T07273
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121313487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121313487
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121313487
04090 CD molecules [BR:
pspa04090
]
121313487
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121313487
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Major cadherins
121313487
CD molecules [BR:
pspa04090
]
Proteins
121313487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Stevor
Motif
Other DBs
NCBI-GeneID:
121313487
NCBI-ProteinID:
XP_041102025
LinkDB
All DBs
Position
3:81507284..81569409
Genome browser
AA seq
912 aa
AA seq
DB search
MYLREGSGVLLLLLLAASQIPIEGRGSQLCNAGFSEDEYNAAVSGSVLEGQPLLNVRFVD
CGRNGRLRYETTDPSDFRIGDDGVVYAARNVHISSKETTFSVKARDTETQEQWQATVRLM
PTLAHSEKQQNGKKSSAPEFPQQIREIVFPQQHPDRSGQLKRMKRDWVIPPINVPENSRG
PFPLELVRIRSDRDKNRSLRYSVTGPGADQPPTGIFIINPISGELSVTKPLDREQISNFH
LRAHAVDLNGNQVENPIDIVINVIDMNDNRPEFLHQIWNGTVPEGSKPGTYVMTVTAIDK
DDPNSHNGILRYKILSQNPESPSSNMFTINNQTGDIITVAAGLDREKVPQYTLIIQATDM
EGNPTYGLSNTGTAVIKVTDVNDNPPEFTARTFYGEVPENRVNVIVANLTVTDKDQPNTP
AWNAVYRITGGDSTGRFAIPTDPNSNEGLVTVVKPIDYETSRMFVLTVVAENQVPLARGI
NLPPQSTATVSITVIDMNESPYFNPNPKLIKQEEGLPAETMLTSFTAQDPDRYMQQTLRY
SKLSDPANWLKIDAVSGRISTIAVLDRESPYVKNNFYNATFLASDSGVPPASGTGTLQIL
LMDINDNAPHVFPEEAEICEKPEPNAINITAIDGDIDPNSGPFAFELPYKPFDVKKNWTI
TRLSGDYAQLSLQIGYLESGVYELPIIITDSGNPPKSHTSILRIKVCQCDHNGDCADVER
IIAAGLGTGAIIAILLCIITLLILVLLFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYD
EEGGGEEDQDYDLSQLQQPDTVEPDAIKPVGIRRLDERPIHAEPQYPIRSAAPHPGDIGD
FINEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLASSSSGGDQDYDYLNDWGPRF
RKLADMYGGSDD
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgagagaaggctcaggggtgcttctgctattgctgcttgcagcttcgcagatt
cccattgaaggcagaggatcccagttgtgcaacgctggattttcagaagatgagtacaat
gcagctgtgtctgggagtgtacttgaaggccagcctcttctaaatgtgagatttgtagac
tgcggaaggaatggacgacttcggtatgaaaccactgacccatcagactttaggataggg
gatgatggagtggtttatgctgcaagaaatgtccacatttcctccaaggagactacgttt
tctgtgaaagcacgggataccgaaacccaggagcagtggcaggcaacggtgagactgatg
cccacgctggcacacagtgaaaagcaacagaatggcaagaaatccagtgctccagagttc
ccccagcagatccgggaaattgtgtttccacagcaacacccggaccgtagtggtcagctg
aagcgcatgaagagagattgggtcatccccccaatcaatgtgccagaaaactcccgaggc
ccttttccactagagcttgtcaggatcaggtcagatagggacaaaaaccgctccctgcgc
tacagtgtcacaggacctggagcagaccagcctcctactgggatcttcatcattaatcca
atttcaggagaactgtctgtgactaagcctttggatcgggagcaaatatctaactttcat
ttgagggcacatgcagtggatctgaatggaaaccaggtggaaaatcccattgacattgtt
atcaatgtgatagatatgaatgacaacagacctgaatttctgcatcaaatctggaatggc
actgttcccgaagggtcaaagccaggaacttatgttatgactgtcactgctattgacaag
gacgaccccaattctcacaatggtattctgagatacaagatcctgtcccagaatcctgaa
agcccttcttcaaacatgtttactataaacaatcagactggagacattatcactgtagca
gcaggacttgacagagagaaagtaccacaatatacgttaataattcaggcgacggatatg
gagggaaacccgacatatggcctctctaacacgggaactgctgttatcaaagtcacagat
gtcaacgacaaccctcctgagttcacagctcgaactttctatggagaagtgccagaaaac
agagtcaatgttattgttgccaacttaacagttactgataaggaccagcccaacacgcct
gcctggaatgcagtctatagaataacaggtggtgattctacaggaagatttgcaattcca
actgacccaaacagtaatgaaggcttggttactgttgtcaagcccattgactacgagacc
agtcggatgtttgtactaactgtggttgcggaaaatcaagtgcctctggccaggggcatc
aatctccctcctcagtcaactgcgactgtctccattacagttattgacatgaatgagagt
ccctattttaatccaaaccccaagcttatcaaacaggaagaaggcttgccagctgaaaca
atgctaacaagcttcactgcccaggatcctgatcgttatatgcagcaaacactgaggtat
tcaaaactatcggatcctgcaaattggttgaaaattgatgctgttagtggacgaatatct
acaatcgcagttctggacagggaatctccatatgtgaaaaataatttttacaatgctacc
ttccttgcatcagacagtggagttcctcctgcaagtggaactgggacgctgcagattctc
ctgatggatatcaatgacaatgctccacatgtgtttcctgaagaggcagaaatctgtgaa
aagcctgaacccaatgccatcaacattacagcaattgacggggacattgaccccaattct
ggcccctttgcctttgaacttccttataagccctttgatgtaaagaagaactggaccatt
acccgtttgagtggcgattatgctcaactaagtctccagattggttatcttgaaagtgga
gtctatgagctccctataataatcacagactctggcaatccgcccaagtcccacacatcc
atccttcgaataaaggtgtgccagtgtgaccacaatggagactgcgctgacgtggagcgg
atcattgctgctggtctcgggacgggagctatcattgccattctgctctgcatcattacc
ttgctcattcttgtcctgctgtttgtggtttggatgaaacgtcgtgacaaggaacgccaa
gccaagcagctgctgatagatcctgaggatgatgttcgtgacaacatcctgaaatatgac
gaggaaggtggtggagaagaggaccaggattacgacctgagccagcttcaacagcctgat
acggtagagccagatgccatcaagcctgttggaattagacgtcttgatgagagaccaatc
catgccgagccacaatatccaatacgatcagctgctccacaccctggggacattggcgac
ttcattaatgagggtctcaaggcagcagacaatgacccgacagctccaccctatgactct
ctgctggtgtttgactatgaaggcagtggatctacagcaggctctttgagttccctggcc
tcttccagtagtggaggcgaccaggactatgattatctgaatgactggggaccacgtttt
aggaaacttgcagacatgtatggtggaagtgatgactaa
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