Polyodon spathula (Mississippi paddlefish): 121313511
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Entry
121313511 CDS
T07273
Name
(RefSeq) GATA-binding factor 6-B-like
KO
K17897
GATA-binding protein 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121313511
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121313511
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Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
121313511
NCBI-ProteinID:
XP_041102084
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Position
3:complement(83118675..83128376)
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AA seq
501 aa
AA seq
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MDLSEPNWSTVKRLSSRSPGPSPAEQNSFNSDRRDRPDSASEKLRSPSATNLDTEENQPT
EGRSLHSYVHSGHHISLPRSEDVTLFTDLDHGNKLIISSGNFKGSLVVDPSDMYQTLAMA
AAQGPAGYDTSASSFMHSTTTSPVYVPTTRVGPMISGITYLQGSGASQPGHAVSNHSVWS
QPASESPSYSTGSPHASNRFHYSPSPPVNNGASRDGNYSNTLNVNGRDQYSPLARPLNGS
YPSPYSPYVGAQLTTAWPTGPFDNTMLHTLQNRGAPIPIRAPNGDILDDLGESRECVNCG
SISTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRMSSSRRIGLSCANCHTSTTTL
WRRNADGEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKSLNKSKAPLGSSNPVPMT
PTSSSSSNSEDCTKTGSPSAPMPASGINSSAMSGQGDSTNTGSAALKYSGQEGLYAGVSL
TSTAEVTASVRGETWCALALA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggacctcagtgaacccaactggtccacggttaagcggctctcatctcgcagcccaggg
ccttcgccggctgaacaaaattcctttaacagtgacagaagagacagacctgattctgca
tcagaaaagcttaggtcaccatcggctactaatcttgacactgaagaaaaccagccaaca
gagggcaggtcactacactcctacgttcattctggacatcacatcagcctaccgagatcg
gaggacgtaacactcttcacggatttagaccacggcaacaagcttattatttccagtggg
aatttcaaagggagcttagtggttgaccccagcgacatgtaccaaactttagccatggct
gcggcccaggggccagcaggatacgacacgtctgccagtagctttatgcactccacaaca
acttctccagtttacgtaccgacaaccagggttggacccatgatctccggcatcacgtac
ctgcaagggagcggggcttcacagccaggccacgcggtcagtaatcattctgtgtggtcc
caacctgcctcagagagcccatcttacagcaccggtagcccccacgcctctaaccgtttc
cactactctccaagtccgccagtgaataacggagcatcaagggatggcaactacagtaac
acgctgaatgtcaacgggagagaccagtacagtcctctggcaagacctctaaatggatct
tacccgagcccatattcaccttacgtgggagcgcaacttacaacagcctggccaacagga
ccctttgacaacactatgctccatactttacaaaacagaggggcacccatacccattcga
gcaccaaatggagatatactggatgatttaggtgagagcagagaatgcgttaactgtggc
tccatatctacgcctctgtggagacgagatggcacagggcactatctctgtaacgcgtgt
gggctgtacagcaagatgaacgggctaagcagaccgcttatcaaaccacaaaaacgaatg
tcttcatcgaggcggatcggcctgtcctgtgcgaactgccacaccagcactaccacactg
tggcgcaggaatgcagacggggaaccagtgtgtaatgcttgtggactctacaccaaattg
cacggggtacctaggccacttgcaatgaagaaagaaggaatccagacgcggaaaagaaaa
cccaagagccttaataaatccaaggccccccttggcagcagcaatcccgttcccatgact
ccaacctcctcgtcttcatcgaactcagaggactgtacgaagactggatctccatctgca
ccaatgccagcatcaggtatcaattcctcagcaatgtcgggccaaggagatagcaccaac
actggaagcgctgcactgaagtattcaggtcaagagggcctctacgcgggagtcagtctg
acctccactgctgaagtcacagcctcagtccgaggggagacgtggtgtgctctggcatta
gcctga
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