Polyodon spathula (Mississippi paddlefish): 121313521
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Entry
121313521 CDS
T07273
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121313521
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121313521
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121313521
Ion channels [BR:
pspa04040
]
Other channels
Mechanosensitive channel (Piezo)
121313521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
121313521
NCBI-ProteinID:
XP_041102106
LinkDB
All DBs
Position
3:83828067..84009932
Genome browser
AA seq
2863 aa
AA seq
DB search
MASEVVCGLIFRLLLPICLVAACLFRYNGLSFVYLIYLLLIPLFSEPTKATMQGHTGRLL
KSLCFTSLTFLLLHVIFQITINSLQARNTINPDFNCSTWEKSIRQIGFESVRGADPGNGI
RVFLPDIGMFVAGLATWLLCRSLAQKTPTEDMVQYNTDFENDEQEEKLEMEGDVMFDEDF
EAGDECGMEEEVLEEEEEEEEEEEEEEESTKLKILRRVAGVASKLKDVIGNIITTAGKVV
VTILLGLTGIMLPSLTSAVYFFVFLGLCTWWSFCRTFDPLIFSCLCVLMAIFSAGHLIGL
YLYQFQFFQEFVPPRDFYARLFGVTPVIQTNCSTTWMIISHPNLLWFHYINPVMLLVLYY
TLATLIRLWLQEPIEPMDIDEEENPELEEGKDETGNRIVVTAEKRRRMWQAVHYATEERK
LLSMTQDDYNTSDILLVKVNGTPVDYHNINSTLAIENGPTKLDVYSTPQYKVDRADDTSE
KKEEGDCDYEVDDDNKDEEETSEEEESPKVHAVVTIFRFIMKQSYICALIAMMAWSITYH
SWLTFVLLIWSCTLWMVRNRRKYAMLTSPFMVFYGNLLLSLQYIWSIDVDEIPKVSGILE
KKGDPFAELGSKILCALTFWLLLRQHLMEKKEKLEDAGNDALSDIRVAKEEKEEKEKEKE
IMHVLGNLVKAMFVKYWIYVCGGMFFFVSFEGKIVMYKIIYMVLFLFCVALYQVHYDWWR
RILKYFWMSVVVYTMFVLILVYTYQFESSPSVWSNMTGMDEEKLKDLGLEQFGVAELFTR
IFIPTSFLLVCILHLHYFHEHFLELTDLKTLATKQDSTIYRLVHQDGSLVDITMMNVTTS
TAKDEVEEKSQVEIDEKGEEKEPEESGDKGGSRHCSEVDQPSGAETLTEETSDFKNKWHL
VIDRLTVLFLKFLEYFHKLQLFVWWLFELHIIKVVSSYIIWVTVKEVSFFNYVFFICWAF
ALPYSQFRPLASSICTIWTCVIIVCKMLYQLSSIDEGSYSVNCTMSLNWTEEKRKDMMTS
LLYNKSIDPSNWVGLKKSSPLLEYLRNNLLMLAILAFEITIYRHQEYYRLKNNLTAPATK
TIFHAITRHHLDDGIVNCVKYFINYFFYKFGLETCFLMAINVIGQRMDFYAMLHAFCLIA
VMYRRRRKAIAEIWPKYCCFLACILTFQYFICIGIPPAACKDYPWRFQGSGMDSNVIKWM
YFPDFHTSPNPVFLVYDFMLLLCASLQREVFEDENKAAVRIMAGDNVEICRDLDAASFSQ
HNPVPDFIHCRSYLDMLKVAMFSYLFWFVLTIIFITGTTRISIFCMGYLVACFYFLLFGG
GLLLKPIKVILHFWDFLIAYNVFVITMKNVLSIAACGYIGPLVKNCCWLIQTLSLACTIK
EYKPPEKTENCDLPSDEAGIIWDSICFAFLLLQRRVFMSYYFLHVVADIRASQILASRGA
ELFQATIVKAVKARIEEEKKSMDQLKRQMDRIKTRQQKFKKGKERMLSLAQESGEGATLI
QNEEEEDDEGEADKEKAKGKKKQWWRPWVDHASMVRSGDYYLFETDSEEEEEEEKKEDEV
PPKKSAFQFVYQALMTDSKTTLKEQSKEKMKFWKRYTSKGNKKKDDKEAYVAIECGEQEE
EPGATGEGKKSNGPDNIIKRVFNIVKFTWVLFLTLLDSFTEWLNSISREHIDISTVLRIE
RCMLTREIKKGNVPSREGIHIYYQNQMRLNLSRESGLDQLDDDLSASCPHNADRKRGASR
MDSLDSVASRDSLSSVYTEATMLFSRQSTLDDLDGPPEHVPKTSERARPKLRKMYSMEMS
SSSVDSDSIVSSEPTQCTTVFSRQGTTDTIEEVEDEEDEGALTSVVYQTDSGVPLGAGGP
GYPDEEPGYKIEVDANRAEDQECYTEQCDSGDQEHGVGDQELNVGDHQYGAEDHMYPAEC
VIELYTPDTDGPATYPTDIEGDVPPSYSKAVSFDRMSVSSIEDSADNQLMAMTTDDSRTE
NLDDIILPSLTHELTASELLLNKMFYDEELESSDSFYKQQPQILQLCYALYNTLVARSEM
VCYFVIILNHMISASMLTLVLPILIFLWAMLSVPRPSKRFWMTAIVYTEVAIVIKYFFQF
GFFPFNQNLVVNKNKPYHPPNIIGIEKKEGYVLYDLLQLLALFFHRSILKCHGLWDEDDF
SVTENATHRDESEDEKSMSTERRASAESLKSVNLAASLESVHVHFPEKQTPVRRKSSSGG
SQISHRSNRSSNRSKRGSTSTKNSTRRSSSVISVQQKTRKELLIEKLKEQFIMAKALTIK
KTLEIYIPIKQFFYNLIHPEYSAVTDVYVLMFLADTVDFIIIVFGFWAFGKHSAAADITS
SLSEDQVPEAFLVMVLIQFGTMVVDRALYLKKTVMGKVIFQVILVFGIHFWMFFILPGVT
ERRFSQNIVAQLWYFVKCIYFGLSAYQIRCGYPTRVLGNFLTKSYNYVNLFLFQGFRLVP
FLTELRAVMDWVWTETTLSLSSWICVEDIYAHIFVLKCWRESEKRYPQPRGQKKKKVVKY
GMGGMIIALLICIVWFPLLFMSLIKSVAGVVNKPLDVSIKITLAGFQPIFTMSAQQTQLK
DLSASDFKAFTRSYNKINDAALQFLEAYTHEDVTIAELEGSSNSLWTISPPSRRKLIADL
EKKDSDFSLSISWTIQRNLSLGAKAEMAFDKHVIQLDQKVKYGLIDLLTGVENAPPVNIS
NIFPCYIRAPSDSNSKPIKQLYTDGNYHNIYVKLERNMNSTNQSQEWWIVHDKDNKKGLK
LYVFSDQVSPPSLGFLAGYGIMGLYASVVLVIGKFVREFFSGISHSIMFEELPNVDRILK
LCTDIFLVRETGELELEEDMYSKLIFLYRSPETMIKWTREKTK
NT seq
8592 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagaagtggtgtgtggattgatcttcagattgcttctcccaatatgtctagtt
gcagcatgtctgttccggtacaatgggctatcgtttgtctacctcatctacctcttgctt
attccacttttttcagaaccaacaaaagcaacaatgcagggacatacaggccggttatta
aaatccttgtgttttacaagcctaacctttctgctgctccacgtcatctttcaaatcaca
attaacagccttcaagccagaaacaccattaaccctgacttcaactgttcaacgtgggag
aaatccattcggcagataggcttcgagagtgtaagaggagcagatcctggcaatggtatt
agggtgttcctacccgatattgggatgtttgttgcaggcttggcaacatggcttctgtgc
cgaagtctggctcagaaaacacccacagaagacatggtgcagtacaacacagattttgaa
aacgatgaacaggaagagaagcttgagatggagggcgatgtgatgtttgatgaggatttc
gaagcgggagatgaatgcggaatggaagaggaggtgctggaagaagaagaagaggaggag
gaggaagaagaggaggaagaagaaagcacaaaacttaaaatactgcgcagagtcgcagga
gtggcgtcaaaattaaaagacgttattggcaatattataactaccgctggaaaagtagtt
gtaacaatattacttggtttgacaggtattatgttaccgtctctgacctcagctgtgtat
ttctttgtatttttggggctgtgtacttggtggtccttttgtcgaacgtttgatccgctg
atattcagctgcctatgtgtattaatggccatattcagtgcagggcacttgattggactt
tatttgtaccagtttcagttctttcaggagtttgttccaccaagagacttctatgcaaga
ttgtttggtgtgacacctgtaattcaaaccaactgctcaactacatggatgataatatct
cacccaaatttgctgtggtttcactatataaatcctgtcatgcttttggtgctgtactac
actctcgccaccctcattcgactgtggcttcaagaaccaattgaaccgatggacattgat
gaagaagagaatccagaactggaagaagggaaagacgaaaccggcaatcggattgttgtg
acagcagaaaagagacgaagaatgtggcaagcggtacactatgcaaccgaggagagaaaa
cttctgtctatgacccaggatgattacaacacttctgatatactgttggttaaagtgaat
ggaacccctgttgattaccacaacataaactcaaccttagccattgagaacggcccaacc
aaactagatgtgtactccacgccccagtacaaggtcgacagagcagatgacacatcggag
aaaaaagaagagggcgattgtgattatgaggtggatgatgataataaagatgaggaagaa
acatcagaagaagaagaaagccccaaagtccacgctgtggttacaatattcagatttatt
atgaagcaaagctatatctgcgctctgatagctatgatggcatggagtatcacctatcac
agttggctcacctttgttctgctgatctggtcttgcacactttggatggtccgcaacaga
cggaaatatgccatgcttacttctcctttcatggtgttctatggaaacctgttgttgagc
cttcagtatatttggagcattgatgttgacgagattccgaaagtttcaggaattttagag
aagaaaggggacccgtttgcggaactcggatcgaaaattctttgtgctttaacattctgg
ttgctgctccggcaacatttgatggagaaaaaggagaagttagaagatgcagggaatgat
gctctgtctgacatcagggtagctaaagaggaaaaggaggagaaggagaaagagaaagaa
atcatgcacgttctgggtaacctggttaaagcgatgtttgtcaagtactggatctatgtc
tgtggaggcatgttcttcttcgtcagctttgaaggaaaaatagtcatgtataaaattatc
tacatggtgctattcctgttttgtgtagcactgtatcaggtacactacgattggtggaga
agaattttaaaatatttttggatgtctgttgtcgtttacaccatgttcgtccttatcctt
gtctacacgtatcagtttgaatcctccccaagtgtctggtccaacatgacggggatggat
gaagaaaagctgaaggatctggggctggaacagtttggtgttgcagagctcttcactagg
atattcatcccaacttccttcttgcttgtgtgcattctgcacctgcactatttccacgag
cactttctcgagctcacagacctgaagaccctggccaccaagcaggacagtaccatttac
aggctagtgcaccaggacggtagtttggttgacatcaccatgatgaatgtgaccaccagt
actgctaaggatgaggtggaggagaagagtcaggtggaaatagatgaaaaaggagaggag
aaagaaccagaggaaagtggggataaaggagggagcagacactgcagtgaagtagaccag
cccagcggagccgagaccctaactgaggaaacatcggatttcaagaataaatggcatctg
gtcatagaccgtctgacagtgctttttttgaagtttcttgagtattttcacaaactgcag
ttgtttgtttggtggctttttgaactacacattatcaaagtagtgtcatcctatatcatc
tgggtcacagtcaaagaggtctccttcttcaattatgtattttttatatgttgggctttt
gcgcttccatatagccagttccgcccactagcatcaagcatctgtactatatggacctgt
gttataattgtctgcaaaatgttgtaccaactgtcttctatagatgaaggaagctactct
gtaaactgtacaatgtcattgaattggactgaagagaagagaaaagacatgatgacatcc
ctcctttataataaatctattgacccttccaactgggttggattaaagaagtcatctccc
ctcttggagtaccttaggaacaaccttttgatgctggcaatcttggcctttgaaataaca
atttaccgccaccaggaatattatagattgaaaaacaatctgacagcacctgcgactaaa
accatctttcatgctattacaagacatcacttggatgatggaattgtgaactgtgtcaag
tatttcataaactacttcttctataagtttggtttggagacatgcttccttatggcaatt
aatgtgatcggccagagaatggatttctatgcaatgctccatgccttctgtttaattgct
gtaatgtaccggcgcaggagaaaagccattgcagaaatctggccaaagtactgctgcttt
ctggcatgcatcttgacattccagtacttcatttgtattggcattccacctgcagcttgt
aaagactatccgtggagattccagggttctggtatggactccaatgttataaaatggatg
tactttcctgatttccacacaagccctaatccagtctttcttgtctatgactttatgctt
ctgctctgtgcatccctgcaaagagaagtgtttgaagatgagaacaaagcagcggtgcgg
atcatggctggagacaacgtggaaatatgtagggatctggatgcagcttccttcagccag
cacaatccagtgcctgacttcattcactgcagatcttacctggacatgctgaaggtggcg
atgttcagctatctcttttggtttgtgctcaccatcatcttcatcacaggaacaactcgg
atcagcatattctgcatgggctacctggtggcctgcttctacttcctgctgtttggtggg
ggtctcttactgaaacccatcaaagtcatcctgcatttctgggactttctcatcgcctac
aacgtgtttgtgatcaccatgaagaatgtcctgtctatagcagcctgtggctacattggt
cctttggtcaaaaactgctgttggttaatccaaacattgagtctggcctgcactattaaa
gaatataagccccctgagaagactgaaaactgtgacttacccagtgatgaagctggcatc
atttgggacagcatttgctttgccttcttgttgcttcagaggagagtcttcatgagctac
tacttcttgcatgtagtcgcagacattagagcatcccagatcttagcctcaagaggagca
gaactttttcaggcgactattgtgaaagctgtgaaagctagaattgaagaggagaaaaaa
tccatggatcagctcaagagacaaatggatcgtatcaaaacccgacagcagaagttcaag
aagggcaaggagagaatgttgagcttggcccaggagtcaggagagggggcgaccctgatt
cagaatgaggaagaggaggatgatgaaggagaagcagacaaagaaaaagccaagggcaaa
aaaaagcagtggtggcggccttgggttgaccatgcttccatggtgaggagtggggattat
tacttgtttgagacggacagtgaggaggaagaagaggaggagaaaaaggaagatgaagtg
ccccctaagaaatctgcattccagtttgtttaccaagccttgatgacagattccaaaaca
accctcaaggaacagagcaaagagaaaatgaagttttggaagaggtacactagtaaaggc
aacaagaaaaaagatgacaaagaagcttatgttgccattgagtgtggagagcaggaggag
gaaccaggagccacaggagaaggaaagaaatctaatggaccagataacatcataaagagg
gtttttaatattgtgaagttcacctgggtcctgtttttgacactgctggacagctttaca
gaatggctgaactccatttccagggagcatatcgatatatccactgtgctcaggatagaa
cgatgtatgctgaccagagaaatcaaaaagggaaatgttccatctcgggagggtatccat
atttattaccagaaccagatgcggttgaatctttccagggagtctgggctggaccagctt
gatgatgacctctctgcttcatgtcctcacaatgcagaccggaaacgtggggcatccaga
atggacagcttagactctgtagcctctcgtgacagcttgtccagtgtctacactgaagcc
accatgctgttttcacggcagtctaccttagatgatttagatggacccccagaacatgtt
cctaaaacaagtgagcgtgctcgacctaagcttcgcaaaatgtacagcatggagatgtcc
tcctcatcagttgacagtgacagcattgtgtcaagtgaaccaacacagtgcaccacagtg
ttctcccgtcagggtaccactgacacaattgaagaagtggaggacgaagaggatgagggc
gccctcaccagtgttgtatatcagacagactcaggggtgccattgggggcagggggtcca
ggataccccgatgaggaacctggatataaaatagaggttgatgcaaaccgtgcagaggat
caggaatgttacactgaacaatgtgattcaggggatcaagaacatggggtgggagatcag
gaattaaatgtaggagatcaccaatatggtgctgaagatcacatgtacccagcagaatgt
gtgatcgagctgtacacccctgacactgatgggcctgccacctaccccacagacattgag
ggagacgtgccgccttcttacagcaaagctgtcagcttcgacagaatgtctgtcagctct
atcgaggactctgctgacaaccagttaatggccatgacaacggacgacagcaggacagaa
aatttggatgacatcatattgccatcccttacccacgagctgactgccagcgagctgctg
ctgaacaagatgttttatgatgaagagttggaaagctctgatagcttctacaaacagcaa
cctcagatactacagctttgctatgccctctacaacacactggtagctcgctcagaaatg
gtgtgttactttgtcatcattctgaatcacatgatttctgcctccatgttaaccctggtg
ctccccatcctcatcttcctgtgggccatgctttcagttcccaggcctagcaagcgtttc
tggatgacggccattgtctacactgaggtagcgattgtgataaaatactttttccagttt
ggtttctttcccttcaatcagaacttagtggtcaataagaacaagccctatcacccaccc
aatataataggaattgagaagaaggaaggctatgtgctctatgacctgcttcagctcttg
gctctgttctttcacagatccattttaaagtgccacggcttatgggatgaagatgacttt
agtgtcacagagaatgcaactcacagggatgagtcggaagatgaaaagtccatgtccact
gaaagaagggcatctgctgagtctctgaaatccgtaaacctggcagcttccttggagtcg
gttcatgttcacttcccagaaaagcagacccctgtcaggagaaagagctccagtggcgga
tcccagatctcacacaggtctaaccgttcctccaacaggtccaaaagaggaagcacaagt
accaaaaacagcaccaggagaagtagcagtgtgataagtgtccagcaaaagactcgaaag
gagcttctaattgaaaaattaaaggaacagttcatcatggccaaggcattgacaattaaa
aaaactcttgaaatctacatacccattaagcagtttttctacaatctgatccacccggag
tacagtgcagtgaccgacgtctatgtgctgatgttcctggctgacactgttgacttcatc
ataattgtatttggattttgggcatttgggaaacattcagctgctgcggatatcacttcc
tctctgtctgaggatcaggttccagaggctttcctggtcatggttttgattcaattcgga
accatggtggtggaccgagccctttacctgaagaagactgtcatgggcaaagtcatcttt
caggtcatccttgtgttcggcatacacttctggatgttcttcatcttgccaggtgtaact
gagaggcgattcagtcagaatattgttgcccagctctggtattttgtaaaatgcatctac
tttggattatcggcctatcagatccgttgcggatacccgacacgtgtccttggtaacttc
ttaacaaaaagctacaactacgtcaacctcttcttattccagggattccgcctggtaccc
ttcttgactgaactcagagctgtgatggactgggtgtggacagaaacaactcttagtctg
tccagttggatctgtgtagaagatatctacgcccacatttttgtactaaaatgctggaga
gagtcggaaaagcgataccctcaacctcgaggacagaagaagaagaaagtggtaaagtac
gggatgggaggcatgatcattgcactgcttatctgcattgtgtggttccccctgcttttc
atgtctctcatcaaatctgtggctggtgttgtcaataaaccattggacgtctccatcaaa
ataacccttgcaggtttccagcccatctttacaatgagtgcccagcaaactcaattaaag
gatttatctgccagtgattttaaagcgtttacaaggagttacaacaaaataaatgacgct
gcattgcagtttttggaagcctacacccatgaggatgtcacaattgcagagctggaaggg
agttctaattctctgtggaccatcagccctcctagtcgtagaaaactgatagcagacctg
gaaaaaaaagattcagatttctctctttctatttcgtggaccattcaaaggaatctcagt
cttggggctaaagccgagatggcgtttgataagcatgtaattcagctagatcaaaaagta
aaatatggtcttatagatctattgactggagtagaaaatgcaccccctgtcaatataagt
aatattttcccatgctatatccgagcacccagtgattccaattcaaaacctattaagcag
ctttacacagatggcaattaccataacatctacgtaaaacttgagcgaaacatgaacagt
accaatcagtcacaggagtggtggattgtgcatgataaagataataaaaaaggcttgaaa
ctgtatgttttcagtgatcaagtcagcccaccaagtttaggtttccttgctggatatgga
atcatgggtctctatgcttctgtcgtgctggtgattggaaagtttgtgcgcgagttcttc
agcgggatctcccactcaatcatgttcgaagaacttcccaacgtggatcgcatcctcaag
ctttgcacagacatcttcctggttcgtgagactggggagctcgagctagaggaggacatg
tactccaagctcatcttcctctacagatctccagagaccatgatcaaatggacacgggag
aagactaaatga
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integrated database retrieval system
