Polyodon spathula (Mississippi paddlefish): 121313534
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Entry
121313534 CDS
T07273
Symbol
acss2l
Name
(RefSeq) acyl-CoA synthetase short chain family member 2 like isoform X1
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00010
Glycolysis / Gluconeogenesis
pspa00620
Pyruvate metabolism
pspa00630
Glyoxylate and dicarboxylate metabolism
pspa00640
Propanoate metabolism
pspa01100
Metabolic pathways
pspa01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
121313534 (acss2l)
00620 Pyruvate metabolism
121313534 (acss2l)
00630 Glyoxylate and dicarboxylate metabolism
121313534 (acss2l)
00640 Propanoate metabolism
121313534 (acss2l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121313534 (acss2l)
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
121313534 (acss2l)
Lipid biosynthesis proteins [BR:
pspa01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
121313534 (acss2l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
ACAS_N
zf-nanos
Motif
Other DBs
NCBI-GeneID:
121313534
NCBI-ProteinID:
XP_041102128
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Position
3:84490808..84511761
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AA seq
679 aa
AA seq
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MSRMVIPGTTRTEEKLFNPPGELQKDAHVPNFESYLRLYKKSIEEPEEFWKEVAEGFFWK
SPPKGEFLKYNFDVTKGNVNVKFMEGAKTNICYNILDRNVKEKNRGEKVAYYWEGNSPSH
SCSITYSQLLKQVCKFANVLKNMGVKKGDRVAIYLPMIPELVYSMLACARVGAVHSIVFA
GFSSESLCERILDSQCSFLITADGVYRGDKLINLKQISDEAMEKCKEKENFVVKNCIIVR
HIGKRKNNANVYNTFQTPWNADTNVWWDDVMKNSSEECEPEWVDAEDPLFILYTSGSTGK
PKGVLHTVAGYLLYTALTFKYVFDYHPDDVYWCTADIGWITGHSYITYGPLANGATSVLF
EGVPVYPHVGRFWEIIEKHSVSKFYTAPTAIRLLMKYGQEPVKKFNLGSLKILGTVGEPI
NPEAWLWYYNVVGEKRCPVLDTFWQTETGGHVITPLPAATPLKPGSATFPFFGVLPIILN
EHGEELEGEAEGYLVFKQPWPAIMRTVYGNHERFENTYFKKFPGFYVTGDGCRRDKEGYY
WITGRIDDMLNVSGHLLSTAEVESALTEHPVVAEAAVVSCPHAVKGECLYCFVTLKNGRE
FSHSLAEELKKQVREKIGPIATPDFIQNAPGLPKTRSGKIMRRVLRQIARSEKDLGDLST
LADPKVVEVLFSQRCEATA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggatggtgatccctggaactacacgcacagaggagaagctctttaaccctcct
ggagagctgcagaaagacgctcacgttcctaatttcgaaagctacttgaggctttacaag
aaatccattgaagagccggaggagttttggaaagaggttgctgaaggtttcttctggaag
agtcctccaaaaggagagtttctgaagtataactttgatgttacgaaaggcaatgttaat
gtcaagttcatggaaggcgctaaaaccaatatatgttacaacatcctagacagaaatgtg
aaagagaagaatcgtggagaaaaagtggcatattactgggaagggaattcacctagccac
agctgttctatcacatacagtcagctgctgaagcaagtctgcaagtttgccaatgtttta
aaaaatatgggagtgaagaaaggggacagagtagcaatctacctacccatgatcccggag
ctagtatattccatgctagcatgtgcaagagtaggagcagtacattccatagtgtttgca
ggtttctcatcagaatctctgtgtgagagaatcctggattcccagtgttcatttctcatc
actgcagatggtgtttatagaggagataaactaatcaaccttaagcagatctccgatgag
gcaatggagaagtgcaaagaaaaggaaaactttgttgttaaaaattgcatcattgtaagg
cacattggaaagaggaagaacaatgccaatgtttacaacacatttcagacaccctggaat
gcggacaccaatgtgtggtgggatgatgtaatgaaaaactccagtgaagaatgtgaaccg
gagtgggtcgatgcggaagatcctctcttcatcctctacacaagtgggtccactggtaaa
ccaaagggagttttgcacacagttgccggctaccttctctacaccgcgctcacgtttaaa
tatgtttttgactaccaccctgatgatgtgtactggtgtacggctgacatcggttggatt
actggtcactcatacattacttacggaccacttgccaatggcgccacaagcgtgcttttt
gaaggtgtaccagtctaccctcacgtgggaaggttctgggagataattgaaaaacacagc
gtgtcaaagttctatacagcgccaactgccattcgactgctgatgaagtacgggcaggaa
cctgtgaagaagttcaaccttggttctcttaaaatcctgggtactgttggagagcctatc
aaccctgaggcttggctgtggtactacaatgttgttggagagaagaggtgtccagtcctg
gatactttctggcaaacagagactggtggtcacgtgattacacctttaccagctgccact
cccctgaaacctggctctgctacatttcctttctttggggtgctgcccatcattttgaat
gagcatggagaagagcttgagggggaagcagaaggctatttggtcttcaagcagccatgg
ccagctataatgcgcacagtgtatggaaatcacgaacggtttgagaacacctatttcaaa
aagttccctgggttttacgtcacgggtgatggctgtcgaagggataaagaggggtattat
tggatcactggtaggattgacgacatgctcaatgtatctggacacttgctgagcactgct
gaggtggagtcagccctgacggagcaccctgttgtggcagaggctgcagtggtgagctgc
ccccatgctgtcaaaggggaatgcctctattgctttgtcacattgaagaatgggagagag
ttcagccattctcttgcagaagaactgaagaagcaagtacgggaaaaaattggaccaatt
gccacaccagactttatccagaatgcaccaggactgcctaaaacacgttcaggaaaaata
atgagacgggtcctgagacagattgcccgcagcgaaaaagaccttggagacctctccacg
ctggcagaccccaaagttgtggaggttctcttcagccagaggtgcgaagctactgcttga
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