Polyodon spathula (Mississippi paddlefish): 121313554
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Entry
121313554 CDS
T07273
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121313554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121313554
Transporters [BR:
pspa02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
121313554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
Pentapeptide_4
LRR_At1g61320_AtMIF1
DUF6077
Motif
Other DBs
NCBI-GeneID:
121313554
NCBI-ProteinID:
XP_041102172
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All DBs
Position
1:8466294..8517320
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AA seq
727 aa
AA seq
DB search
MDDTYRDRTSLVKGAKEIAREAKRQAVKKVNKAVDRAQDEYTHRSYSRFQDEEEEEDNHN
YKQGGQYGEPANDDEGSSDATEGHDEEDEIYEGEYQGIPNTGQAKDNQADLGQAVMGKDR
RELESERQADEEELAQQYELIIQECGHGRFQWQLFFVLGMALMADGVEVFVVGFVLPSAE
TDMCVPNSGAGWLGSIVYLGMMVGAFFWGGMADKVGRRQTLLICMSVNGFFAFLSSFVQG
YGLFLLCRVFSGFGIGGAVPVVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAI
IPHYGWSFSMGSAYQFHSWRVFVVVCAFPCVCSVVSLTFMPESPRYFLEVGKHDEAWMIL
KQIHDTNMRARGQPEKVFTVNRIKTPKQINELIEMQAETGNWFSRGFAQIRSELYGIWLT
FMRCFHYPVKDNTIKLAIVWFTLSFGYYGLSVWFPDVINHLQSDEYASRVKTFSKERLAN
FTFNFTLENQIHSDGEYINNRFIGMKFKSVTYIDFTFKNCYFDDVTSLSTYFRNCTFLET
FFYNTDIEESKFINTEVINSTFHHNKTGCQMTFDDDYSAYWVYFVNFLGTLAVLPGNIVS
ALLMDKIGRLTMLGGSMVLSGISCFFLWFGTSESMMIGMLCLYNGLTISAWNSLDVITVE
LYPTDRRATGFGFCNALCKLAAVLGNLIFGSLVGITKAIPILLASTVLVVGGLVGLRLPD
TRANVLM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatgatacataccgggacaggacatcattagttaagggggcgaaagaaatcgcaagg
gaggcgaagcggcaagctgtgaagaaagtgaacaaagctgtggaccgggcgcaggacgag
tacacccaccgctcctacagccgcttccaggacgaggaggaggaggaggacaaccacaat
tacaagcagggcggccagtacggagagccggccaacgatgacgagggctccagtgacgcc
acggaaggccacgatgaagaagacgagatctacgagggcgagtatcagggcatccccaac
acaggccaggccaaggacaaccaggcggacctggggcaggctgtgatgggcaaggaccgg
cgggagctggagtcggagcgccaggctgacgaggaggagctggcccagcagtacgagctc
atcatccaggagtgtgggcacggccgcttccagtggcagctcttcttcgttctgggcatg
gctctcatggcagacggggtggaggtcttcgttgtggggtttgtgctccccagcgcagag
acagatatgtgcgtccccaactctggagcagggtggctgggcagcattgtgtacttgggg
atgatggtgggggcgttcttctggggcggcatggcggacaaggtgggccggagacagacg
ctgctgatctgcatgtctgtcaatggattcttcgctttcctctcctcctttgttcaaggc
tatgggttgttcctgctctgtcgtgtgttctcagggtttggaattggaggagcagttcca
gtcgtgttctcctactttgctgaggtgctggcgagggagaagagaggagagcacctgagc
tggctgtgcatgttctggatgatagggggaatctatgcctcggccatggcttgggccatc
ataccacattatggctggagtttcagcatgggctcagcctaccagtttcacagctggcga
gtgtttgtggttgtatgtgcctttccctgcgtctgctctgtcgtgtctctcaccttcatg
ccagaaagcccaagatactttttggaggttggaaagcatgacgaagcctggatgattctt
aaacagatccacgataccaacatgagagctcgtgggcagccagagaaagtctttacagtt
aacagaatcaagactccgaaacagattaatgagctgattgagatgcaggctgagactgga
aattggttttcaaggggcttcgcacaaatacgctcagagctctatgggatttggttgacg
tttatgaggtgcttccactaccctgtgaaagataataccattaagcttgcaatcgtctgg
tttacactgtcttttggttactatggcctgtccgtctggtttcctgatgtcatcaatcac
ctgcagtctgacgagtacgcatcaagagttaaaactttcagcaaggagagactcgccaat
ttcactttcaactttactttggagaaccagatccacagtgacggagaatacatcaacaac
aggttcatcggcatgaaattcaaatcagtaacctatatagacttcaccttcaagaactgt
tactttgatgatgttacttcactgagcacgtactttaggaactgtacctttttagaaacc
ttcttctataacacagatatcgaggaatccaagttcatcaacacagaggtgataaacagc
acatttcatcacaacaagaccggctgtcagatgacctttgacgatgactatagtgcctac
tgggtctactttgtgaacttcctgggcactctagcagtgctgcctgggaatattgtgtca
gcgctgctcatggacaagattggacgcttgacaatgttaggtggctctatggtcctttct
ggaatcagctgcttctttctgtggtttggaaccagtgagtcaatgatgataggaatgctg
tgcctttacaatggccttactatatcagcctggaactccctggacgtgatcactgtggaa
ctctatccaacggacaggagggcgactgggtttggattctgcaatgcgctctgtaaattg
gcagcagtgcttggaaacctgatattcggctcgctggttggcatcaccaaggccatcccc
attttactagcgtccactgtcctggtcgtgggcggccttgtgggactccgacttccggac
acgagagccaatgtgctcatgtaa
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