Polyodon spathula (Mississippi paddlefish): 121313593
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Entry
121313593 CDS
T07273
Name
(RefSeq) sorting nexin-13-like isoform X1
KO
K17925
sorting nexin-13
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121313593
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121313593
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
121313593
NCBI-ProteinID:
XP_041102220
LinkDB
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Position
3:complement(88692093..88728756)
Genome browser
AA seq
969 aa
AA seq
DB search
MYSSPMVFHSLNRTSLSIWGWGGLGVVLFLITFGPFAIFYLAFYVLCFTGGCFAVTLLFG
KTNSEKYLEKCEHSFLPATQSGIPKTLEEMKRESRQIKIDRRLTGASIIDEPLQQVIQFA
LRDYIQYWYYTLSDDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRV
FRKAQERMTEKDDQKQLKDEPEELVESFFEAEVEMERKICRDLVCTSPRDEEGFLRDLCE
VLLYLLLPPGDFHNKNMRYFVREILARGILLPLINQLSDPDYINQYVIWMIHDSSSNYEA
FMNILKLSDEVGELEAVKDKAMEELQFLRSLDTAGDDINVIKNQINSLLFVKKVCDTRIQ
RLQSGKEVDALKLVANFGKLCIIPLEHILVHNIALQFFMDYMQQKGGQADLFFWLTVEGY
RVTAQQQLEVLKSWQKDGKKQTNQTKDLLKAAALGVYEQYLSEKASPQVQVDKSLVERLA
EKLNKEDPTPEIFDDIQRKVYDMMLRDERFYPSFRQHPLYVRMLAELDMLKEPSFRGSDD
GDGESFNGSPTGSINLSLDDLSNANSDESMQLHAFISDTGVCNDHGKTYALYAITVFRKN
PDGSEDTWKTYRRYSDFHDFHMRLTGQFENLTSILKLPGKKTFNNMDKDFLEKRKKDLNA
YIQFLLNPEMMKACPPLALYLCDFLENKAYNKGKGDFARKMDTFVNPLRNSMRNVSNAVK
AIPDSLAEGMTKVSDNMGKMSEKLGQDLKQSMLKVPPLIQKSDIDPEHCRVSAQLDDNVD
DNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDLMTSPE
QVADHVKHFRDAFWPNGILAEKPPHRNKAIRMRTRVAAKTNLLGIMPDELKHIIGADTTR
KGILRVFKMFQHNQLNRRLVYVFIEGFLETMFPQYKFPELFIKLHSRSERMEKYSQKLKT
SQVPSLQKR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtattcatcaccaatggtgtttcacagtttaaacagaaccagtctttccatatgggga
tggggaggccttggtgttgtgctttttcttataacttttggaccttttgcaatattttat
ttagcattttatgtcctgtgcttcactggtggctgttttgcggttactcttttatttgga
aaaacaaactccgaaaaatatctggaaaagtgtgaacactcctttcttcctgcaacacaa
tccggcatacccaagaccttggaagaaatgaaacgagaaagtaggcaaataaaaatagac
cgaagactgactggtgccagcattattgatgaacctttacagcaggtaattcagtttgcc
ctgagagactacatccagtactggtattacacactaagcgatgatgaatcttttcttctt
gaaatccgacaaacagtacaaaatgcccttgtccagttttctaccaggtcaaaagaagta
gactggcagccgtatttcacaacacgattagtagatgactttgcaactcaccttcgggtt
tttagaaaagctcaagaaaggatgacagaaaaggatgatcaaaaacaactcaaggatgaa
ccagaggagcttgtagaatccttctttgaagctgaagtagaaatggagagaaaaatctgt
cgtgatcttgtctgcacttcacccagagatgaagaaggttttctgagggatctgtgcgag
gttttactgtacttattactacctcctggagacttccataacaagaacatgagatacttt
gtgagggaaatccttgcaaggggaattcttcttccgttgattaaccagctcagtgatcca
gactatattaatcagtatgttatatggatgattcatgattctagcagtaactatgaagcc
tttatgaacattctcaaactaagtgacgaagtaggagagctggaagctgtgaaagataaa
gccatggaagagctgcagtttcttcgctctttagacactgcaggagatgatatcaatgtg
attaagaatcaaataaacagcctgctatttgtgaagaaagtttgtgatacaaggatacag
aggttgcaatcaggaaaggaagtagatgccctgaaacttgtagccaactttggaaaactt
tgcataatacctctggaacacatattggtccacaacattgcactacagtttttcatggat
tacatgcagcagaagggagggcaggcagaccttttcttctggctcacagtggaagggtat
cgagtcacagcacagcagcagctggaagttttaaagagctggcagaaggatgggaaaaag
cagaccaaccagaccaaagacttgttgaaagctgctgcacttggagtttatgaacagtat
ctctcagaaaaggcatcccctcaagttcaggttgacaaatccttagttgaaagactggca
gaaaagctcaacaaagaagacccaacacctgaaatatttgatgatatccaaagaaaggtg
tatgacatgatgctgcgggatgagcggttctacccgtctttcagacagcacccgctttat
gtgcggatgttggctgagcttgacatgttgaaagaaccaagtttcagagggtcagatgat
ggagatggagaatcatttaatggttctccaacaggaagcattaatttgtctctagatgac
ctctccaatgctaattctgatgaatcaatgcagttgcatgcattcatttctgatactgga
gtgtgcaatgaccatgggaagacgtatgcattgtatgcaatcactgtgtttcggaagaat
ccagacggcagcgaggacacctggaaaacctatcgtcgttacagcgacttccatgacttt
catatgcgcctcacggggcagtttgaaaaccttacaagtattttaaagctccctgggaag
aaaaccttcaacaacatggataaggatttcttagaaaagagaaaaaaagacctgaatgcc
tacatacagttcttactgaatcctgaaatgatgaaagcttgtccccctctggctctctat
ctgtgcgattttttggaaaacaaagcctacaataaagggaaaggggactttgcacgtaag
atggatacctttgtaaacccactacgcaattccatgagaaatgtctccaacgctgtcaag
gccattcctgacagtctggcagagggaatgacgaaagtgtcggacaacatgggaaaaatg
tcagaaaaactggggcaggatttaaaacagtcaatgttgaaggttcctccattgattcag
aagtctgatatagaccctgaacactgccgtgtctctgcacagctggatgataatgtggat
gacaatattccactcagggtcatgcttcttttaatggacgaagtctttgatctgaaagaa
agaaaccagtggttgaggcggaatattaaaaacttactgcagcagctcattcgagcaaca
tatggagacacaataaacaggaaaattgtagatcatgtggacctcatgacctcccctgaa
caggttgcagaccatgtgaaacatttcagagatgccttttggcccaatggtattttagca
gaaaagccaccccacagaaataaagcaatccgaatgagaacgagagtggctgccaagact
aacctgctaggaataatgcccgatgagctgaagcacattattggtgctgacacaacacgg
aagggaatattacgggtctttaagatgttccagcacaaccagttaaaccggaggcttgtt
tatgtttttatagagggatttcttgaaaccatgtttcctcaatataaattccctgagctg
tttatcaaactacattcaagatctgaacggatggaaaaatattcacagaaattaaagaca
tcccaggttccctccttacaaaagaggtga
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