Polyodon spathula (Mississippi paddlefish): 121313601
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Entry
121313601 CDS
T07273
Name
(RefSeq) transcription factor Sp4-like
KO
K09194
transcription factor Sp4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121313601
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
121313601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
Zap1_zf1
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
121313601
NCBI-ProteinID:
XP_041102236
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Position
3:89464479..89479004
Genome browser
AA seq
758 aa
AA seq
DB search
MSDQKKETMATEGGKSGGDYGNKGKTSVLQDAQPSPLALLAATCSKIGGAPGENQAGGQQ
HIIIDPSQGLVQLQNQPQHLELVTTQLAGNAWQIVAAAPAVSKENSAQQGVAVVTSAPGS
NNDSIATSKAKTVTSSNVTVGQQQFQVIQVQNMQNSSGGVQYQVIPQIHTLDGQQIQFSS
VNPTALNVQHDQIQFIPAGNNQAIIATPNRATSANIVTQNVANQAIPFQIRPGMSFPLQL
QTIPGAQTQMVTTVPINIGGVTLALPVINNVAAGGGSLQLVHPADGGVANGNQLATTPIS
SAVSSMPESPSCTTTAAATLSGSDTLVINSAEAGQYTNAPSTPESAPDQESHVTGNEPDG
SNPVQANGLQTVQDQSSQIQQVQIVGQPMLQQIQIHQPQQQLIQGLSQQTIQLQPGQTVQ
TVQQQPLQNVQLQAVQSPTQVLIRAPTLTPSGQISWQTVQVQNLSNVQLQNAGLPQQLTF
TPVTSNATGGTFAQLTPLAVGGTPITLNASQLTSLPNIQTVNIANLGAAGVQVQGVTGQQ
QNQDGVKVQSSPVTVAVGNIANAALSAVSTDQITQVQIQQTQQVSDQEGQPGKRLRRVAC
SCPNCRDGEGRNNSEPGKKKQHICHIEGCGKVYGKTSHLRAHLRWHTGERPFVCNWIFCG
KRFTRSDELQRHRRTHTGEKRFECPECSKRFMRSDHLSKHIKTHQNKKGASALAIVTTED
MEDTVNNVLGSPRIVTVASLSQDSNPASPNASSNMDEF
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaaaaaaaagaaacgatggcgacagaaggaggaaaatctggtggggattat
ggtaataaaggcaaaacttctgtattgcaggacgctcaaccctctcctctggcactgctc
gccgccacttgcagcaaaataggaggggctccaggtgaaaaccaggcagggggacagcaa
cacattatcatcgatcccagtcaagggcttgttcagctgcaaaaccaaccacagcatctg
gaactggtcactacgcagcttgctgggaacgcctggcagatcgtcgcagcagctccggcg
gtatcgaaagagaacagtgcacagcaaggggttgctgtggtcaccagtgcacccggcagc
aacaatgacagcatcgccaccagcaaggctaagaccgtcacctccagcaatgttacagtg
gggcagcagcaattccaagtcattcaggtgcagaatatgcagaattcttccggcggcgtc
cagtatcaggtgattccgcagattcatactttggatggccagcagatccagttcagctct
gtaaaccccactgctctgaacgtgcagcacgaccaaattcagttcatacctgctggaaat
aaccaggccatcatcgctacgccaaacagggctacgtctgcaaatattgtcacccagaat
gtggcgaatcaagcgataccctttcaaatcaggccggggatgtctttcccgttgcagttg
cagaccattcctggcgctcagactcaaatggtgaccaccgtacctattaacataggcgga
gttactttggcattgcctgtgataaacaatgtggccgcgggaggagggtctctccagctt
gttcatcctgctgatggtggggtcgccaacggtaatcagctagctaccacgcctatctcc
agtgctgtgagtagcatgccggaatctccttcctgcacaaccactgcagctgcgaccctg
tcgggcagtgacactcttgtgataaactccgccgaagctggacagtacaccaacgccccg
tccacgccagaaagcgcacctgatcaagaatcccacgtcacgggtaatgagcctgatggt
tcgaacccggttcaggcgaacggattgcaaacggttcaggaccagtccagtcagattcag
caggttcagattgtgggacagcccatgctgcagcaaatacagatccaccagccccagcaa
cagctgatacaaggtctttcacaacagacaattcagctccaaccggggcagactgttcag
acggtccagcagcagcctttgcagaacgttcagctccaggcagtgcagagtccaacccag
gtgctcattcgagccccgaccttgacaccgtctgggcagatcagctggcagaccgtgcag
gtgcagaacctttccaatgtgcagctgcagaacgcaggattaccccaacagctcaccttt
accccggtgacttcaaacgccacaggaggcacatttgcccaactcacgcctcttgctgtt
ggaggtactcccattactttaaatgcctcccagctcacatcgttgcccaacattcagaca
gtcaacattgcaaatcttggagctgccggtgttcaagtacagggagtaacaggccagcag
cagaaccaggacggagtgaaggttcagtcgtctccagtaacagtagccgtggggaacatt
gcaaacgcagcgctcagtgctgtcagcaccgaccagatcacacaagtgcaaattcaacag
acccagcaagtctctgaccaggaggggcagccaggcaagaggctcaggagggtcgcgtgc
tcgtgtcccaactgccgagacggagaaggaagaaacaatagcgagccggggaagaagaag
cagcacatctgccacatcgagggctgcgggaaggtatacgggaagacgtctcacctgcga
gcacacctgcgctggcacacgggagagaggccctttgtgtgtaactggatcttctgcggc
aagaggttcacccggagtgacgagctgcagagacaccggcgcacccacacaggtgagaaa
agatttgaatgcccagaatgttcaaagaggttcatgagaagcgaccacctttccaagcac
atcaaaactcaccagaacaagaagggtgcttcagccctggctattgtcaccactgaggac
atggaggacactgtgaacaatgtcctgggctccccgcggattgtcaccgtagcctcgctg
tcccaggattcaaacccagcttccccaaacgcatctagcaacatggatgagttttaa
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