Polyodon spathula (Mississippi paddlefish): 121313610
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Entry
121313610 CDS
T07273
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121313610
03041 Spliceosome [BR:
pspa03041
]
121313610
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121313610
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121313610
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
RRM_1
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
KH_PNO1_2nd
KH_NusA_2nd
KH_NusA_1st
MOEP19
KH_Vigilin
RRM_5
KH_DEAH11
Motif
Other DBs
NCBI-GeneID:
121313610
NCBI-ProteinID:
XP_041102256
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All DBs
Position
3:complement(89805738..89846880)
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AA seq
586 aa
AA seq
DB search
MNKLYIGNLSEDASPVELESLFKEWNIPFSGPFLVKTGYAFVDCPDDNWAMKAIDTLSGK
VELHGKLIEVEHSVPKRQRSRKLQIRNIPPHLQWEVLDSLLAQYGTVENCEQVNTETETA
IVNVTYGAKDQARQAIEKLNGYQLENYDLKVTYIPDEMTTAQSPQQQPPHGGRRGFGQRG
PPRQGSPGAGARPKQQSDVPLRVLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA
GAAEKPITIHSTPEGCSSACKTLMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGK
NLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIEACAKAEEEVMKKIRESYENDMAA
MNLQSHLIPGLNLNALGLFPPSSPGMPPSPMSAAPPSGGASYPSFGQQQPESETVHLFIP
ALAVGALIGKQGQHIKQLSRFAGASIKIAPAEGPEAKQRVVIIAGPPEAQFKAQGRIFGK
LKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDEND
EVIVKITGHFYASQLAQRKIQEILAQVKRQEQQKTLQSGQPQPRRK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctttatatcggcaacttgagtgaagacgcgagcccggtggagttggaaagt
ctctttaaggagtggaatataccttttagtggcccgtttcttgttaaaactggttacgcc
tttgtagattgcccagatgacaactgggctatgaaggccatcgacacactctcaggtaaa
gtagaactccatggaaaacttatagaggtggagcactcggtccccaaaagacaaaggagt
cgcaaacttcagatcaggaacatcccgccacacctgcagtgggaggtgttggatagctta
ttagctcagtatggcacagtagaaaattgtgaacaagttaacactgagacagagactgca
atagtgaatgttacatacggtgccaaggaccaggccaggcaagcaatagagaagcttaat
ggctaccagctagagaactatgatctgaaggtgacctacatcccagacgagatgactacg
gcacagtccccccagcagcagccccctcacggaggcagacgtgggtttggtcagaggggt
cctccacggcaaggctcccctggtgcgggcgcccggcccaaacagcagtcggacgtgcca
ctgcgtgtgctggtgcccacccagtttgtaggagccatcattggcaaggaaggagcgacc
attagaaacatcacaaaacaaacgcaatccaagattgacatccatcggaaagagaatgct
ggtgctgcggagaagccaatcacaatccactcgactcctgaaggatgttcctcagcttgt
aaaacgctcatggaaatcatgcagaaagaagctcaggatactaaattcactgaagaaatt
cctttgaagattttagcacacaacaactttgttggacgactaataggaaaagaaggcaag
aatttaaagaagattgagcaagacacggacaccaaaatcaccatttcacccttgcaggat
ctaaccctttataatccagagaggaccatcacagtcaagggcagtattgaagcctgtgcc
aaggctgaagaagaagtaatgaagaaaatccgagaatcctatgaaaatgacatggctgcg
atgaatcttcaatcgcatttaatccctgggttaaacctgaatgccttgggtctgtttcct
ccctcgtctcctgggatgccaccctctccaatgagtgctgctcccccctctggcggagcc
tcgtatccttcatttgggcagcagcagccagaatcggagactgtacatttgttcatccca
gccttggctgtgggagccctcattggcaaacaaggacagcacatcaaacagctctcccgc
tttgcaggagcatctattaagattgctccagccgaaggaccagaggccaagcagagagtg
gtgataatcgcaggaccaccagaggctcagtttaaggctcaaggaagaatctttgggaaa
ctaaaagaagaaaacttctttggacccaaggaggaagtaaagctggaggctcatataaaa
gtgccgtcttatgctgctggcagagttataggcaaaggaggcaaaacggtgaatgagttg
caaaaccttaccagtgcagaagtagttgttccaagagaccagacccctgatgaaaatgat
gaagtaatcgtgaaaataacaggtcatttctatgcaagccagcttgcccagcgaaaaatt
caagaaattttggcccaggtaaaaagacaagaacagcagaaaacgctgcagagtggacag
ccccaaccaagaagaaaataa
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