Polyodon spathula (Mississippi paddlefish): 121313612
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Entry
121313612 CDS
T07273
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X1
KO
K12897
transformer-2 protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121313612
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121313612
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121313612
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121313612
Spliceosome [BR:
pspa03041
]
Common components
Common spliceosomal components
SR proteins
121313612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
RRM_3
Motif
Other DBs
NCBI-GeneID:
121313612
NCBI-ProteinID:
XP_041102258
LinkDB
All DBs
Position
3:complement(89875788..89891816)
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AA seq
313 aa
AA seq
DB search
MSDVEDTHFDGRGSRSPSKSDCGSPVRVKSESRSASGSPSRASKRSESRSRSRSKSRSRS
RKHSHRRYSRSRSRSHSHRKKSRSRSYSPECRRKKSRSTSPMSNRRRHAGSRTRFSNDIK
KEASNHSDARLFHQANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGR
SRGFSFVYFERIDDAKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSSGG
SSGGGGSSGSSSGGRRRDSYYDRGGYDRGGYDRGGYDRYDEYDNRYSRRRSPSPYYSRCR
SRSRSRSYSPRRY
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgttgaggatacacacttcgatggaagaggatcccgttctccatcgaaatct
gattgtggcagcccagtgcgtgtgaagtctgagagtcgttctgcgtctggtagtccttca
agagcttcaaaacggtcagagtccaggtcaagatcaaggtccaaatcaaggtcgcgctct
aggaagcactctcacaggaggtattcacgctcaaggtcccgctcacactcgcacaggaag
aaatccagaagccgttcatactcgcctgaatgccgtcgcaagaagagccggagcacctct
ccaatgtcaaatcgtcgcagacatgcaggcagcaggacaagattcagcaatgacatcaaa
aaagaggcaagcaatcatagtgatgccaggcttttccaccaggcaaatcctgacccaaac
acctgtcttggagtgtttgggttaagcctgtacacaacggagagggacctgcgtgaagtg
ttttctcgttacggaccgctggctggcgtgaatgttgtctatgatcagagaacaggacgg
tcaagaggattttcatttgtgtacttcgaaagaattgatgatgctaaagaggcgatggaa
cgtgcaaatggaatggagcttgacggaaggcggatacgtgtagattactccatcaccaaa
cgggcccacactcctactcctggcatttacatgggaaggccaactcacagcagtggcggg
agcagtggcggtggtggcagcagcggaagtagtagtggaggacgtcggcgtgattcctat
tatgaccggggaggctatgaccggggaggctacgaccggggaggctatgaccgatacgac
gagtacgataatagatacagtcggagacgatctccatctccttattacagtagatgcaga
tcccgttctagatctcgttcctacagtcctcgacgttactaa
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