Polyodon spathula (Mississippi paddlefish): 121313616
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Entry
121313616 CDS
T07273
Name
(RefSeq) AP-3 complex subunit beta-1-like isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121313616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121313616
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
AP-3 complex
121313616
Endosome - Golgi transport
121313616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
Cnd1
HEAT_2
INTS1_R4
HEAT_GCN1
MOR2-PAG1_C
NPCBM_assoc
AP3B1_C_2
Motif
Other DBs
NCBI-GeneID:
121313616
NCBI-ProteinID:
XP_041102275
LinkDB
All DBs
Position
1:complement(8952765..9066352)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSNNNSMSYNDQGGAVESATEAGLETTPTTSTGAGFGLFSTDYKKNDDLKAMLESSKDSS
KLEAMKRIVGLIAKGKNASELFPAVVKNVASKNIELKKLVYVYLVRYAEEQQDVALLSIS
TFQRALKDPNQLIRASALRVLSSVRVPIIVPVMMLAIKEAATDLSPYVRKTAAHAIQKLY
SLEPDQKEHLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVEE
WGQVLIISMLTRYARTQFLSPWKQDEILEENCEQAFYGSDDERNNKNVPASKPYVMDPDH
RLLLRNTKPLLQSRNTAVVMAVAQLYWHLAPRSEVSLVTKSLVRLLRSHREVQFIVLQNI
ATMSIQRKGMFEPYLKSFYVRSTDPTHIKTLKLEILTNLANGANISTVLREFQTYVKSQD
KQFAAATIQAIGRCATNISEVTDTCLNGLVLLLSNRDETVVAESVVVIKKLLQTQPTQHS
DIIKHMAKLLDNIAVPMARASIVWLIGEYCERVPKIAPDVLRKMAKVFTCEEEIVKLQTL
NLAAKLYLTNAKQTKLLTQYILNLGKYDPNYDIRDRTRFIRQLIVPNEKSGALSKYAKKI
FLAPKPAPVLESPFKDRDRFQLGTLSHTLNTKTSGYLELSDWPAVAPDQSVRNVEVVEPF
TESTTLAGKVKAAKPDDAFYSGSGEEEASGSGNESSSSEESGSDSESGSDDEENGRKKSS
SDSSSSSSSSSSSSGNESRSSQSESGSKKKNLKKKNPRKENKKSGKNESENDETTKRGSK
TKTDSVSSESEESSSEKSSSSSESGSEPETDSDSGTDQKKQKPKPKKEETREAREKTTKQ
EVSLLDLDDFAPVSMAAAPRPAMLSPSLITDLEGLSLLNTSLTIDVTSPVYVPAKSHELL
HRMSGKGLAAQYHFPRQPCIYSSDMVSVQVTLTNSGDQKVEDIHIGEKKLPSGLQIHDFN
SIESLEPGASITVSMGINFNDSTQAANFQLCTKSDQFNVSIQPAVGELLLPVTMSEQDFR
TQQGLLVPRQCLPLSS
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataacaacagcatgtcctataatgaccaaggaggagcagtagagtctgctacc
gaagcggggctggagacaactccgaccacttcaactggagcggggttcggcctcttcagc
acagattataaaaaaaatgatgaccttaaagcaatgttggagagcagcaaggattcctca
aagctggaggctatgaaaagaattgtcgggctgattgctaaaggaaaaaatgcatctgaa
ttattccctgcagtggtgaagaatgtggcaagtaaaaacatcgagctgaagaagctggtg
tacgtgtacctggttcgctatgcagaagagcagcaagatgtggctcttctctccatcagc
acattccagcgtgctctgaaggatcctaaccagctcatccgtgctagtgctctgagagtt
ttatccagtgtccgagttcctattattgttccagtcatgatgctggccattaaagaagca
gctactgatttgtcaccatatgtcagaaaaactgcagctcatgcaattcaaaaactgtac
agtcttgaaccagatcagaaagaacatttaattgaagtaattgaaaaactactaaaggat
aaaagcacgctggttgctggaagtgttgtaatggcatttgaggaagtgtgtccagatcgg
atagatctgattcacaagaattaccggaaactctgcaacctgctggtggacgtggaggag
tggggacaagtacttatcatcagcatgctcaccagatacgcacgcacgcagttcctgagc
ccctggaagcaggatgaaatattggaagagaactgtgaacaagccttctacggttcagat
gatgagaggaacaacaaaaatgtgcctgcatccaagccctatgtgatggacccagaccac
cgattgcttctgaggaacaccaagcctttgttgcagagcagaaacacagctgttgtgatg
gctgttgctcagctttactggcatttagctcccaggtctgaagtgagcctcgtcaccaag
tcattagtgcgattacttcgaagccacagagaggtgcaatttattgtgctgcagaacatt
gcaacaatgtctattcagagaaagggcatgtttgagccatatctgaaaagtttctatgtg
agatcaactgatccaacacacatcaagacactaaagctggagatactgactaacctggcc
aatggagctaatatctctacagtcctccgggagttccagacttatgtaaagagtcaagat
aagcagtttgctgctgctacaattcaagccattggaagatgtgcaacaaacatctctgaa
gtgactgatacgtgcctgaacggtctagtgctcctgctttcaaacagagacgagactgtt
gtggcagaaagtgtggtagtcataaaaaaactgctgcagacacaaccaacgcagcacagc
gatatcataaaacacatggcaaaacttttggataatattgccgtgccaatggccagagcc
agcatcgtctggttgattggtgaatattgtgaacgagtcccaaagatagcacctgatgta
ttgagaaaaatggcaaaggtttttacctgtgaagaagagattgtgaagctgcagacattg
aacctggcagctaaactgtaccttaccaatgccaaacagacaaaattgcttacacagtat
atattaaatctaggcaaatacgatccaaactatgacattagagaccgtacaagatttatt
aggcagctgattgtccccaatgagaaaagcggagccctaagcaagtatgcaaagaaaatc
ttcctggccccgaagccagcgccagtgctcgagtctccatttaaagatagggatcgtttc
cagcttggcacattgtctcacacccttaacaccaaaacctcgggttacctggagctgtct
gactggccagcagtggccccggaccagtctgtcagaaacgtggaggtagttgaaccgttc
acagagtcgactactctagcaggtaaagtgaaggcagcgaagccagatgatgcattttat
tcagggtctggggaggaggaagcatcgggcagtggcaatgagagcagtagcagcgaggag
tctggcagtgacagcgagagtggcagtgatgacgaggagaatgggaggaagaagagcagc
agtgacagctcctcctccagcagcagcagcagcagctcctccggcaacgagagccgctcc
agccaatccgaatccggcagcaagaaaaagaatctcaagaaaaaaaatcccagaaaagag
aacaagaaaagcggtaagaacgaatctgaaaatgacgaaacgaccaaaagaggatcaaaa
actaaaacagactccgtttcatctgagtcagaagagagctcttcagagaagagttcttcc
agttctgaatctgggtcagaacctgaaacagactccgactcgggcacagaccaaaagaaa
caaaaaccaaagccaaagaaggaagaaactagagaggcacgagagaagacaacaaaacag
gaagtttcattgcttgatctggatgactttgcacctgtgtccatggctgcagcacctagg
ccagcaatgctctctcccagtttgattacagatctggaaggcttgtccttattgaatact
tctctaaccatcgacgtcaccagcccagtatacgtgcctgcgaaatctcatgagcttctc
catcgaatgagtggcaaagggctagcagcccagtatcacttcccacgacagccctgcatt
tacagctccgacatggtctctgtgcaagtcacactgaccaacagtggagaccagaaagtg
gaagacattcacattggggagaagaaacttccctctggcctccagattcacgacttcaac
agtatagaatctctggagccaggggcatcaatcacagtgtcaatgggcatcaacttcaat
gattctacccaggctgccaacttccagctttgcacgaaaagcgaccagttcaacgtcagt
attcagccagccgtgggagaactgcttctaccagtcaccatgtctgagcaggactttagg
acacagcaaggtctcctggtgcctcggcagtgccttcccctgtcttcctga
DBGET
integrated database retrieval system
