Polyodon spathula (Mississippi paddlefish): 121313629
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Entry
121313629 CDS
T07273
Name
(RefSeq) homeobox protein Hox-A5-like
KO
K09305
homeobox protein HoxA/B/C5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121313629
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121313629
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
DUF739
Motif
Other DBs
NCBI-GeneID:
121313629
NCBI-ProteinID:
XP_041102294
LinkDB
All DBs
Position
3:complement(90683714..90686655)
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AA seq
275 aa
AA seq
DB search
MSSYFVNSFCGRYPNGPDYQLHNYGDHSSVNEQYRDSATMHSSRYGYGYNGMDLSTGRST
SNHFGAGESAPSYASSATTTSAETRYNQPATASHSSLPDPLACGTAASSPVSEPRRAVRN
PIASPTTSSSTSHSSSSSSSTHLCRDGVGKSSGTEDDTPASSGQTSSQNGQNASESSQPQ
IYPWMRKLHMSHDSMAGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS
ERQIKIWFQNRRMKWKKDNKLKSMSMAAAGDVYRP
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttattttgtaaactcgttctgcggtcgttatcctaatggcccagactaccag
ttacataattatggagatcatagctcggtgaacgagcaatacagggattccgcgaccatg
cattccagcaggtacggctacggttacaatgggatggatcttagcactgggcgttcgacc
tcgaatcactttggcgctggtgaaagtgctcccagctatgcatctagtgcaacaacaaca
tctgcagaaaccaggtacaaccaacctgcaacagcctcccactcgtctctacctgaccca
ttagcttgcggtaccgctgccagctctccggtcagcgagcctcgccgcgctgtaagaaac
cccatagctagccccactacctcttcctccacgtctcacagcagcagcagcagcagcagc
actcacttatgcagagatggggttggcaagtcgtctggtactgaggatgacactccggca
agcagcggccagacaagttcacagaacggccagaatgcatcggaatcatcacaaccccag
atatacccatggatgagaaagctacacatgagtcacgactccatggcgggaccagaaggg
aaacgagctcggaccgcctatacgagataccagactctggaactcgagaaagaattccac
ttcaatcgatacctgacgcggagacggaggatcgaaatcgcacatgctctgtgcctctct
gagagacaaattaaaatctggttccagaacaggagaatgaagtggaaaaaagataacaag
ctgaaaagcatgagcatggcagctgcaggagacgtctatcgcccttaa
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