Polyodon spathula (Mississippi paddlefish): 121313666
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Entry
121313666 CDS
T07273
Name
(RefSeq) PHD finger protein 20-like protein 1 isoform X1
KO
K18402
PHD finger protein 20
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121313666
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
121313666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_5
Tudor_3
Tudor_2
PHD
DUF4537
MBT
SH3_Hsr9
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
121313666
NCBI-ProteinID:
XP_041102371
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All DBs
Position
3:93204113..93231428
Genome browser
AA seq
1232 aa
AA seq
DB search
MSKKPPNRPGIIFEIGARVDAQDYLQKWYPSRIEKIDYEEGKILVHFDRWSHRYDEWIFW
DSSRLRPSERPVLRKEGLEEEEQEQEEQQQQQQQQEEEQEEEEEQEQGEQSESLSEMRAS
RLREPPGGTASTEDQTELQQSKQVLRSGEEVLARWTDCRYYPAKVESVSKEGTYTVQFYD
GVIRCVKRMHIKSMPEDAKGQKDWIALVKAATAAAKNKGPCKPRTSANSNKDKEERRAER
ASPGKEGESASLEEVQGAQEAVEEPGSTEKLDKTDASVEVEPKQAAEQPEPVKGKRKKSG
QGSSFQAKRARLNKITGLLVSKVAYEDEHENKEKKSEVPQISEKEPSASTEEKQKTDTEA
TSSPPTQKHVLPSATPPVPVRSRNRRLKHDSGESTGSHKQSKSSCTVSQEEESASAPTPT
PVPTPSAADTPQTTLPLPNPASPPRPSEQSQRRRRSQRLATFTPDPFCEPVHSLPSTTDG
KRLAQKPESQQDLPVHEVLDTTSVPPEEPELPLDLSRSATVAATPPPPAPPASPPQPPET
EKEESPPLKTPADEKTASPTTATVLKGVPKPLKPNKHTREPIVNTKKPEDQSTPKEPLID
LDHNKLKCKIPGCYKTFRKAKLLDYHLKYYHSMDKETESETGSPERAVRTRATCASVPTS
TPPESHDAKRRRTVSTSASLSSHVHALQLESSLSTGLKPSKCIKKKRSSASFSSDGTDAQ
FAAPPREKGLESLHETILKRVIEKDKHAEPGMLRSEKKIKLEEKSQPIGKKKEKDKERKE
KKEKDPFKVKQKKKKKKKKKSKQHNYSDFEDISLAYLERCASPVTRSSGNSLAQRNTSSS
KHTSFQYPRAILTVDLTGENLSDIDFLEDSSTESLLLSGDEYNQDFDSFNLEDSQDEDDA
ANEIVRCICEMDEENGFMIQCEECMCWQHSVCMGLLEDSIPEQYICYVCRDPPGQRWSAK
YRHDKDWLNKGHMYGLSFLSENYSHQNAKNIVSTHQLLADVYSVKKALRGLQLKMEILQN
KHNPNLHLWARSWVNPDEEQPMGGFPECIHHQERIADCINHTSNQKAEDTYITSEHSYQK
PPGFELEHNTAADFMISDGEDAVRLGEEPEAMSEVGTNSVPKEEQVNQESTEITSEVLNE
NTANKMESDDQARTLLQWQVNLLTHIDGVQNQVAGRMDLIEKELDVLESWLDFTGELEPP
EPLARLPQLKRRIKQLLTDLGKVQQMSTLCSV
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaagccccctaatcgtccaggaatcatctttgagattggcgctcgtgtggat
gctcaggactacctgcaaaaatggtatccttcacgtattgaaaagattgactatgaggag
gggaagattctagtccattttgatcgttggagtcatcgatacgacgagtggattttttgg
gacagcagtcggctgcgtccatctgaacgaccagtactgcggaaagaaggactggaggag
gaggagcaggagcaggaggagcagcagcagcagcagcagcagcaagaggaggagcaggag
gaggaggaggaacaggaacagggggaacagtctgagagtctcagcgagatgagagcatct
cgcctccgtgagcctcctggaggtacagccagcactgaggaccaaacagagttacagcaa
tcaaaacaagttttgagatccggagaagaagtattagctcgttggacagattgtcgctac
taccctgctaaggtagaatcagttagcaaagaaggtacttacacagtacagttctatgat
ggagtcattcgctgtgtgaaaagaatgcatatcaaatcaatgcctgaagatgcaaaagga
cagaaggattggattgccctggtcaaagcagcaacagctgctgccaagaacaagggaccc
tgtaaacctcgtaccagcgccaacagcaataaagacaaggaggaaaggagagcagaaagg
gcatcgccagggaaggagggagaaagcgcttctctggaagaggtgcagggtgctcaggaa
gcagtggaagagcctggttccactgagaaattagataaaacggatgcttcagtagaggtg
gaacctaagcaagccgcagagcaacctgaaccagtaaaaggaaagaggaagaaaagcggc
cagggcagctcattccaagcaaagagagctcgtcttaacaaaatcacaggtctactagtt
tcaaaggttgcttatgaagatgagcatgagaacaaagaaaaaaaaagtgaagttccccag
atatctgaaaaggaaccttcagcaagtacagaagagaaacaaaaaactgacactgaagcc
acctcctctccaccaactcagaaacatgttttaccttctgctacacctcctgtcccagtg
aggtctcgaaacagacgtctgaagcatgattcgggagagtctacaggcagccataaacag
tcaaagtcatcctgtactgtgtcacaagaggaagagtcggcgtctgcccccactcctacc
ccagtccccacccccagcgctgcagacaccccacagacgacgcttcctctgccaaaccct
gccagccctcccagaccctcggaacaaagccaacgacgaaggcgatcccagcgtttggcc
acttttacacccgatcccttctgtgaaccagtacactcccttccttcaaccactgatgga
aaaaggcttgcccagaaaccagagtctcaacaggacctacctgtgcatgaggttttagat
accacgtctgttcccccggaggagcctgagctacccctcgacctcagtagaagtgcaaca
gttgctgcaacacccccacccccagcaccacctgcctcacccccccagccccctgaaact
gagaaggaagaatctcctcccttgaaaacaccagctgatgaaaaaacagcttcccccaca
acagctactgttttaaaaggtgttcccaagccgctgaaaccaaacaagcacacaagggaa
cccatagttaacaccaaaaaacctgaggatcagtcaactcctaaggaaccgctgatagat
ttagaccacaataagttgaagtgtaagattcctggctgctacaaaaccttccggaaggcc
aagctgctggattaccatctgaagtattatcacagcatggacaaggagacggagtctgag
actggctctccagagcgagcggtgcgcactcgagcaacctgtgcctctgtccctacctct
actcccccagaaagtcatgatgcaaagaggcggcggactgtgtcaacctctgcttcccta
tcatctcacgtccatgccttacaattggagtcttctttaagtactggtctgaaaccctca
aagtgcattaagaagaagcgctcctctgcctcgttcagttctgatggaacagacgcccag
tttgcagcgccgccccgtgagaagggcttagagagtcttcatgaaacaatactgaagaga
gtcattgaaaaggacaagcatgcagaacctggaatgttaagaagtgaaaagaaaataaaa
cttgaagaaaagagtcaaccaataggtaaaaagaaagaaaaggacaaggaacggaaagag
aagaaggaaaaggaccctttcaaagttaaacagaagaagaaaaaaaagaagaaaaagaaa
tcaaagcagcacaattattcggattttgaagatatctcgctggcctatttggaaaggtgc
gcctctccagtcactcgttcttctggtaactccttggctcagcgcaatacctcttcctcc
aaacacacctccttccagtaccctcgagccattctgactgtggacctcactggggaaaac
ctctctgacattgatttcttggaagactcctcgactgagagcttactgctaagtggggat
gagtataaccaggattttgattcctttaatcttgaggattctcaagatgaagatgatgca
gccaatgaaattgtgcgctgcatctgtgaaatggatgaggaaaatggcttcatgattcag
tgtgaagaatgtatgtgctggcagcacagtgtgtgtatgggattgttggaggatagcatt
ccagagcagtacatctgttatgtctgcagggacccaccaggccaaaggtggagtgcaaag
tatcgtcatgacaaagactggctaaataaaggacatatgtatgggctgtcatttctcagc
gagaattactctcatcagaatgcaaagaacattgtctccacgcatcagctgctggctgat
gtgtacagtgtaaaaaaagcacttcgtggactacagctgaagatggaaatattgcagaac
aaacacaatcccaacttgcacctgtgggcccgatcatgggtgaatccagatgaagagcag
ccaatgggaggttttccagagtgcatacatcaccaggaaaggatagcagactgtataaac
cacacctctaaccaaaaagcagaagacacctatatcactagtgagcacagttaccagaag
ccaccagggtttgagctggagcacaacacagctgccgatttcatgatctcagatggggaa
gatgctgttaggcttggtgaggagccagaggccatgtctgaagtgggcacaaactctgtg
ccaaaagaagaacaggtgaaccaggaaagcactgaaataacttcagaggttttgaatgaa
aacactgctaataaaatggagtcagatgaccaggcaaggactcttctgcagtggcaggta
aacctcctgacccacatcgacggtgtgcagaaccaggtcgctggaagaatggacctgata
gaaaaagaactagatgtattagaaagctggttggatttcactggcgagctagagccacct
gagccactggcaagattgcctcagctgaaacgcaggatcaaacaactcttaacagacctt
ggaaaagtacagcaaatgagtactctctgttctgtttga
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